Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20porosum_20[genbank_20GCA_5F001600255.1_202016-03-01] 37 sequences; 25,989,348 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 2e-11 >seq3 Length=3276928 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 44149 TGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGG 44208 ||| || ||||| ||||| || || |||||||||||||| || ||| | |||||||| || Sbjct 1613804 TGTCGAGGGCATCTTCTTCTCGGGCTCGTTTGCGGCCATTTTCTGGCTCAAGAAACGCGG 1613863 Query 44209 TTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTG 44268 | | |||| || ||||| || ||||| ||| | || || ||||| || || Sbjct 1613864 TCTCATGCGCGGATTGACATTCTCAAACGAGCTCATCTCGCGCGATGAGGGTACCCACAC 1613923 Query 44269 CGATTTTGCTTGCTTGTTA 44287 ||| ||||| |||||| || Sbjct 1613924 CGACTTTGCGTGCTTGCTA 1613942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455820772185