Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20porosum_20[genbank_20GCA_5F001600255.1_202016-03-01] 37 sequences; 25,989,348 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 4e-12 >seq5 Length=2378914 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || || || || || || || || | Sbjct 2288664 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATTACGCTGGAGGTCGAGTCGTCT 2288723 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| || || | || || || || Sbjct 2288724 GACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAG 2288783 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||||||||| || || || |||| |||||| | ||| |||||| Sbjct 2288784 CAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTCTCCGACTACAAC 2288843 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 2288844 ATCCAGAAGGAGTCGAC 2288860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009447578796