Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03- 01] 35 sequences; 31,617,680 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq6 116 8e-21 >seq6 Length=1958011 Score = 116 bits (128), Expect = 8e-21 Identities = 124/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || |||||||||||||| | ||| ||| | |||||||| || || || |||||||| | Sbjct 63254 CTGATTGGCATGAACGCCGGACTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGTCTG 63195 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | || || || || ||||||| |||| |||| | |||||||| | ||||||||| Sbjct 63194 CTCGTCGCCCTCGGCAACGAGAAGACGTACTACTCGACCAACCCCTTCGACTTTATGGAG 63135 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGT 230609 | || ||||| || || ||| ||||||||||||| |||||| Sbjct 63134 ATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGAGTCGCGTGT 63091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823525632050