Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03- 01] 35 sequences; 31,617,680 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2 168 8e-37 >seq2 Length=4354190 Score = 168 bits (186), Expect = 8e-37 Identities = 224/306 (73%), Gaps = 4/306 (1%) Strand=Plus/Plus Query 145963 GGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAA 146022 |||||| |||||||| || |||| ||| ||||||||||||||| || || || Sbjct 191066 GGGTTCTCCTTGATCTTCCGGATCACATCCTGGAGCTGGTCCACGCCTTGGCCGGTATAG 191125 Query 146023 TCTGTCTTGG-AGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGG 146081 || ||| | | | | |||| |||||||||| || | ||||||||| ||||| ||||| Sbjct 191126 TC-GTCGTCGCACGTCTTGTACTCGGCCCCGAAATGGCGCCACTGGAAGCCGTACACGGG 191184 Query 146082 CCCCAGGTC-CCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACC 146140 |||||||| ||| || || |||||| ||||| | ||| ||||| | || ||| || Sbjct 191185 GCCCAGGTCGCCCTCGCGCCG-GTGCCCGAGCCCCACGCGGTCGAGGTACTCGCGGCTCC 191243 Query 146141 CGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCC 146200 ||||| |||||||||| | |||||| | |||| ||| | | ||||||| ||| Sbjct 191244 CGTTGCCGTCCCAGATGTGCACGCCCTTGGCGGCCAGCGCCGCGCCGTCCGTGTTGCCCG 191303 Query 146201 TGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCA 146260 || ||||| |||||||| || | ||| || | | |||||| | |||||||||||| | Sbjct 191304 AGACAAACCACAGCAGCTCCTCAATGACGCCGCGCGTGAAGACGCGCTTGGTGGTCAGGA 191363 Query 146261 GGGGGA 146266 | |||| Sbjct 191364 GCGGGA 191369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076541841400