Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03-
01] 35 sequences; 31,617,680 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1 87.8 4e-12
>seq1
Length=6947394
Score = 87.8 bits (96), Expect = 4e-12
Identities = 178/262 (68%), Gaps = 2/262 (1%)
Strand=Plus/Plus
Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTC-CTTAAGAGTATCAT 94837
||||| |||| || || |||||||||||||| | | ||| ||| || || || |
Sbjct 1522668 GTGGAGACCGATACCGCCGGCAGTCTTGGAGATC-TGGGCGCAGGTCTTGAGGGTGTCGT 1522726
Query 94838 AAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTG 94897
| ||||| || || || || | | | | | |||||||||||| || | |||||
Sbjct 1522727 AGATACCGTCGATCGAGTCCTCCTTCATGGCGACAAGGAAGCACGACGACATCTGGGGGT 1522786
Query 94898 TGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGA 94957
|| || ||| || || || || || || || ||||| || ||| || ||||||||
Sbjct 1522787 TGGGGGTACCAGCGTTGAAGAGGGTAGGCGAGGCGTGGGTGAAGTAGCGCTCCGACATGA 1522846
Query 94958 GATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCA 95017
| | || || |||||||| | |||| ||||| || |||| | ||| ||||
Sbjct 1522847 GGTTGTAAGTCTCAATGACCTTGTCAATGTTGTCGCCGTGGATACCGATCGACACGCGCA 1522906
Query 95018 TAATCATGTCCTGAGGGCGCTC 95039
| ||||||| ||| || |||||
Sbjct 1522907 TGATCATGTGCTGGGGACGCTC 1522928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583556233425
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |