Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03-
01] 35 sequences; 31,617,680 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq2 129 5e-25
>seq2
Length=4354190
Score = 129 bits (142), Expect = 5e-25
Identities = 189/262 (72%), Gaps = 4/262 (2%)
Strand=Plus/Plus
Query 21237 AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAA 21296
||||||||||| || || || |||| | ||||| | | ||||||| ||||| |||
Sbjct 191099 AGCTGGTCCACGCCTTGGCCGGTATAGTCGTCGTCGCACGTCTTGTACTCGGCCCCGAAA 191158
Query 21297 TGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGCCC 21356
|| | ||||||||| |||||||| || ||||| ||||||||||| |||| |||| |||||
Sbjct 191159 TGGCGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCCTCGCGCCGGTGCCCG-AGCCC 191217
Query 21357 TGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACG-CCGCGGCGCG 21414
||| | | | | ||||| ||||| ||||||| || | ||| || |||| |
Sbjct 191218 CACGCGGTCGAGGTACTCGCGGCTCCCGTTGCCGTCCCAGATGTGCACGCCCTTGGCG-G 191276
Query 21415 ACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCCCC 21474
||| | | | ||| ||| |||| || ||||||||||| |||||| | |||||| |
Sbjct 191277 CCAGCGCCGCGCCGTCCGTGTTGCCCGAGACAAACCACAGCAGCTCCTCAATGACGCCGC 191336
Query 21475 TCCAAAACACCCTTTTGGTGGT 21496
| || || | ||||||||
Sbjct 191337 GCGTGAAGACGCGCTTGGTGGT 191358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427775817526800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |