Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03- 01] 35 sequences; 31,617,680 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 4e-13 >seq2 Length=4354190 Score = 89.7 bits (98), Expect = 4e-13 Identities = 103/139 (74%), Gaps = 6/139 (4%) Strand=Plus/Plus Query 5616 TCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGT 5675 |||| | |||| ||||||||| ||||| || || || || | |||||||| Sbjct 3288399 TCTTAAACTCGGCGTCGTTGTGG------TTGAAGAGGACGACCTTGACCTCGCCGCGGT 3288452 Query 5676 AGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGC 5735 |||||||||| | ||||||||||| || | ||| ||||||| | |||||||| |||| Sbjct 3288453 AGTCGGCGTCAACTACGCCCGCGCCGACATTGATACCGTGCTTGGCGGCCAGGCCCGAGC 3288512 Query 5736 GGGGAGCCACGCGGCCGTA 5754 | || || | ||||||||| Sbjct 3288513 GCGGCGCGATGCGGCCGTA 3288531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430054216554920