Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03- 01] 35 sequences; 31,617,680 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq3 114 2e-20 >seq3 Length=3222897 Score = 114 bits (126), Expect = 2e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 15407 GGACCGACGTACTATCACCGACTCAAACACATGGTAAAGGACAAGATGCACGCGCGATCG 15466 || ||||||||||| || || ||||| |||||||| | |||||||| |||||||| || Sbjct 633686 GGCCCGACGTACTACCAGCGTCTCAAGCACATGGTCGACGACAAGATCCACGCGCGTGCG 633627 Query 15467 CACGGACAGGTGACGACGCTCCATCGCCAGCCCAACTGCGGTCGATCGCAAGGCGGTGGC 15526 | ||| | | || || ||| |||||||| | ||||| |||| | |||||| Sbjct 633626 CGCGGCCCGCTGCAGATCCTCACGCGCCAGCCGGTCGAGGGTCGTTCGCGCGACGGTGGT 633567 Query 15527 CTCCGCTTTGGAGAGATGGAAAAGGACTGCATTCTGGTGCACGGCGCCACCCAATTCCTC 15586 || || || ||||||||||| | |||||||| | |||||| | || |||||| Sbjct 633566 CTGCGATTCGGAGAGATGGAGAGAGACTGCATGATCTCGCACGGTATCGCCGGCTTCCTC 633507 Query 15587 AACGAGCGCATGT 15599 || |||||||||| Sbjct 633506 AAGGAGCGCATGT 633494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611391732516000