Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03- 01] 35 sequences; 31,617,680 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq6 197 3e-45 seq1 181 2e-40 seq3 163 5e-35 seq9 120 6e-22 seq4 86.0 1e-11 >seq6 Length=1958011 Score = 197 bits (218), Expect = 3e-45 Identities = 180/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||||||||| || | || | ||| || |||||||| || |||||||| || ||||| Sbjct 41897 CCTCCGCGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 41956 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| ||||| | || |||||||| ||| Sbjct 41957 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 42016 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| | ||||||| ||||||||||| | || || || Sbjct 42017 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCGACC 42076 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || ||||||||||||||||| |||||||| Sbjct 42077 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 42123 Score = 136 bits (150), Expect = 7e-27 Identities = 295/437 (68%), Gaps = 6/437 (1%) Strand=Plus/Plus Query 9937 TGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGA 9996 ||||||||| ||| |||| |||| || || |||||||||||||| |||||||| || Sbjct 63065 TGACGCCCGACTTTGCGTACGCCGAAACACGCGACTCGAAGAAGTTGGCCTTGCCCTGGA 63124 Query 9997 GGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGA 10056 | || || | |||||| ||||| |||||||| | | || ||| || |||| Sbjct 63125 GCGAGATCATCTCCATAAAGTCGAAGGGGTTGGTCGAGTAGTACGTCTTCTCGTTGCCGA 63184 Query 10057 GTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCA 10116 | || || | ||||| || || ||||| |||||||||| ||| || | | ||||| Sbjct 63185 GGGCGACGAGCAGACGGTCGGCGACAAACTCAATGTACTGGCACATGAGTCCGGCGTTCA 63244 Query 10117 TGCCAATCATGCG-GCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCT 10175 ||||||||| ||| | ||||| || ||| | ||| |||| || | ||| || Sbjct 63245 TGCCAATCA-GCGAGACGGGGAGCGCCTCGGTGAGGAACTCCTGCTCAATCTTGACGGCC 63303 Query 10176 TCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGG 10235 |||| || || ||| | | ||| || | | | ||| | || | |||| Sbjct 63304 TCCTTGATAATCTTCTCGATGAGGTCGGGGTGCGGGCGGCGGCGGAGGTGCGTAAACAGC 63363 Query 10236 AGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCC 10295 || |||| | |||||| ||||||||||| |||| |||||| || || Sbjct 63364 AGGCAGGCAAAGTCGGTGTGGAGACCCTCGTCGCGCGAAATGAGCTCGTTCGAGAAGGTG 63423 Query 10296 AGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAAC 10355 |||||||||||||| || || || |||||||| |||| | ||||| || |||| Sbjct 63424 AGACCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGA-- 63481 Query 10356 AGAAGA--CCCTCCACG 10370 |||||| ||||| ||| Sbjct 63482 AGAAGATGCCCTCGACG 63498 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || || | || | ||| || || ||||| || |||||||| || || ||| Sbjct 41669 CCTCCACGCAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 41728 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || || | || |||||||| || Sbjct 41729 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGG 41788 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||| ||| ||||| ||||| | || || || Sbjct 41789 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATCGTGTCCGACGACTCAACC 41848 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || || | ||||||||||| |||||||| Sbjct 41849 TCGAGCGTGATCGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 41895 >seq1 Length=6947394 Score = 181 bits (200), Expect = 2e-40 Identities = 180/233 (77%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || ||||| || |||||||| || || || Sbjct 6691141 CCACCACGCAGGCGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 6691082 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| ||||| | || |||||||| || Sbjct 6691081 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGG 6691022 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| ||||||||| ||||| ||||| | || || || Sbjct 6691021 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 6690962 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCT 68467 || | ||||||||| || |||||||||||||||||||| ||||||||| |||| Sbjct 6690961 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATTTTGCT 6690909 Score = 118 bits (130), Expect = 2e-21 Identities = 1082/1728 (63%), Gaps = 45/1728 (3%) Strand=Plus/Plus Query 30920 CTGTGTCTGGTCAACAAACGGACCGCGGTCTGCTGCAAGGTCAATGACGGTCTTCATAGA 30979 ||| | |||||| | || | || ||||| || |||||||||||||||| |||| || Sbjct 1521300 CTGCGACTGGTCGATGAAGGCTCCACGGTCGGCAGCAAGGTCAATGACGGCCTTCTGCGA 1521359 Query 30980 CAGCTCCCATGCGGTCTTGTAGATTGCCTTGAGCTCAGGGTGGATGCCAATGACACGTTG 31039 | |||||| ||||||||||||| ||||||| || | |||| ||| | | || Sbjct 1521360 AATCTCCCAGACGGTCTTGTAGATGGCCTTGATGTCGTCGGGGATACCAGGAATGTGCTG 1521419 Query 31040 GATGGACCCCCCGTTGGCAATAATCTGGTTCTTCATGGCCTCGGACCACGTGCCACGAGC 31099 |||||| || || ||||| | | | |||||| ||||| ||| ||| | Sbjct 1521420 GATGGAACCACCCGAAGCAATGACGAGCTGCTTCATCTCCTCGTCCCAGAGACCAAGGTT 1521479 Query 31100 GATGAGGTCGCGCACGAGGTAGTTGTTGACCACAGGGAACTCTCCAGCAAGGGTCCGGCG 31159 ||||||||| || | ||| || | ||| || |||| || || | || || || Sbjct 1521480 GATGAGGTCACGAAGGAGCCAGGGGCAGACGACCTGGAAGTCACCTGACAGAACACGACG 1521539 Query 31160 GCTGTACAGATTAGAAGTGATCGGCTCCATAGC-CTCTACGGACCCGCAGATTTGCGCGG 31218 ||| || | || ||| ||||| | ||| ||| | ||| || |||| || Sbjct 1521540 CGAGTAGAGCATCGAGGTGTAGGGCTCGA-AGCACTCGTTCCAGCCGAGAATCTGCGAGG 1521598 Query 31219 TGGATGCGGTGGGCATCAGCGCGGTGGTCAGCGAATTCCTGACACCCTTCTTGACGCGCT 31278 | || ||||||||||| | || | ||||| || | |||||| | |||| || | Sbjct 1521599 TCGAGGCGGTGGGCATAGGGGCAACGAGGAGCGAGTTGCGGACACCGTGCTTG--GCAAT 1521656 Query 31279 CTTCG-AGGG---TCTTCC-AGT--CAAGGCGAGTTACCGGCTCGGTTCCCCAGAGGTGA 31331 |||| | || || ||| ||| || | | || | ||||||| |||||| Sbjct 1521657 CTTCTCACGGAGCTCGTCCCAGTTCCAGAGGTCGGTAGGAACGCGGTTCC--AGAGGTCG 1521714 Query 31332 TACTGCATCACACCACGAGACGCGGGAGACCCCTCAAAGGTAGGATGGGGACCGTGCTCT 31391 |||| | | || | || ||| || ||||| | | || | || || ||| Sbjct 1521715 AACTGAAGCTTGCCCTGCGAGATGGGCGAACCCTCGTACGAGGGGTAGGTGCCAGCCTCG 1521774 Query 31392 TCCGCGAGTTCGCAAGAGGCCTCCACCGCTGCAAAGTAAATATTCTCAAAGATTTCCCGG 31451 | || | || || || | ||| | || || ||| || |||| ||||| | || Sbjct 1521775 ACAGCCATCTCACACGACGACTCGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGGAGG 1521834 Query 31452 TTGAGGTTCTTGGCCGCGTCAGAGTCAAAAGGCATGCGCAGCTTGAAGAACACGTCCTGA 31511 ||||| | || ||| ||||| || |||||||| || | ||| ||| | Sbjct 1521835 TTGAGCTGACGAGCAGCGGGCGAGTCGAAGGGCATGCGGAGAGCCATGAAGGTGTCGGCA 1521894 Query 31512 AGACCCTGGACACCCACTCCAATTGGGCGCCGGCGCATGTTACTAGTCTTCG--CCTCGG 31569 |||||||||||||| | |||| ||||| | |||||||| | ||| | || |||||| Sbjct 1521895 AGACCCTGGACACCGAGACCAACGGGGCGGTGACGCATGTT-CGAGT-TGCGGGCCTCGG 1521952 Query 31570 GAATTGCGTAGGACATGACGTCA-ATGCTCTTGTCGAGGTTCTTGGCCAGAATCTTCACG 31628 | | | |||| | || || | ||| |||||||||||||| | | ||| | Sbjct 1521953 GGACGGGGTAGTAGTTG-CGCGAGATGACACAGTCGAGGTTCTTGGTGACGACCTTGGTG 1522011 Query 31629 TGCTTGCGAAGGTCCTCAAAGTCGTAGGCACCGTTCTTGACGT------AGTTCTGGAGG 31682 || | | || | || |||||||||| ||||| | || || |||| Sbjct 1522012 ATCTCGTGGAGCTTCTTGAAGTCGTAGGTGTTGTTCTCAAAGTCGACAAAGGCAGGGAGA 1522071 Query 31683 ACGATGCTTCCAATGACACACACCGCCGTTTCGTCCGTAGAAGTGTATTCGACAATCTCG 31742 |||| ||| | || || || ||||| | ||||| ||| || | ||||| Sbjct 1522072 GCGATCGAGGCAAGGTTGCAGACGGCAACCTCGTCGGGAGAAGAGTACTCAATGATCTCA 1522131 Query 31743 GCACAAAGATTGCTGCCCGTGATGGTGCCGGCATTGGACTGCATGTTC---TTCACGTTC 31799 | || || ||| | ||||||| || || | |||| |||| || ||| Sbjct 1522132 GTGCAGAGGTTGGACGACTTGATGGTACC--CAGGTG-CTGCTGGTTCGACTTGCGGTTG 1522188 Query 31800 ACGCTGTCCTTGTTGAGCACGTAAGGCATGCCCGTCTCGATCTGCGTGATGATCATCGCA 31859 || |||||||| ||||| | | || || ||||| |||| | | || | Sbjct 1522189 GCGGCGTCCTTGTAGAGCATGAAGGGGCCACCAGTCTCTGTCTGGGCCTCAAGGATGGAG 1522248 Query 31860 TTCCAGACATCGCGCGCTTTGACGA-CTTTCTTCGCACGCCCCTCGGACTCGTAGCGAAG 31918 ||||| | | || |||| | ||| | | | |||| ||| |||||| Sbjct 1522249 AACCAGAGCTTCTGAGCCTTGATGGTCTTGCGACCCTTGCCC-TCGCGCTCGTACTTCTC 1522307 Query 31919 ATACAGGTCCTCGTACTCCTTGCCAAAGG-CATCGGTTAGACCGGGACACTCCTTGGGGT 31977 || || |||| |||||| | | || | || | |||||||| ||||| ||| Sbjct 1522308 GTAGAGAGCCTCAAACTCCTC-CGAGTGGACGTCCGAGAGACCGGGGCACTCGGCAGGGC 1522366 Query 31978 CGAAGAGCGACCATGCGACATCGGCCTCTACTCGCTTCATGAACAGGTCGTTCAGCCACA 32037 | ||| | ||| || |||||||||| || ||||||||||| |||||| | ||| | Sbjct 1522367 ACATGAGGGTCCAGTCGCCATCGGCCTCGACACGCTTCATGAAGAGGTCGGGGATCCAGA 1522426 Query 32038 TCGCGTAAAACAGATTCCTGGCGCGTTGGGTCTCCTCACCCTGGTTACGTCGGAGCAGCA 32097 ||||| || || | | || || ||||| || ||||| ||||| | Sbjct 1522427 GGGCGTAGAAGAGGTCACGAGCACGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGA 1522486 Query 32098 GGAAGTCCATGATGTCGGGGTGGTGGGGCTCGAGGTACACGGCGAAAGATCCCTTGCG-- 32155 ||||||| | || ||||| ||| ||||| ||||| | ||| || | || ||| Sbjct 1522487 GGAAGTCGAAGACGTCGGCGTGCCAAGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCT 1522546 Query 32156 -GCGACCCCCCTGGTTTGCGTATGCAGATGTCGTGTCGTACACCTTCAGCATGGGTACGA 32214 | || ||||||| |||| || || | |||||| | |||||||| || | Sbjct 1522547 TGTTGCCTCCCTGGTCGACGTAACGAGCAGTAGCGTCGTATGCACGGAGCATGGGGACAA 1522606 Query 32215 TGCCATCAGACTCGCCATTGGTCCCCTGGATCTTGGAACCACGGCCGCGAATGTCGCTCA 32274 | || | || | || ||||| || || | ||||| | | || |||| | | Sbjct 1522607 TACCGTTCGAGTAACCGTTGGTACCGGCAATGTACGAACCCTTGGCACGGATGTTGTGGA 1522666 Query 32275 GGTGCAGGCCGATGCCGCCACCAAACTTGGAAAGCTGTGCA-ACGTCACCAAGAGACTTG 32333 ||| || ||||| ||||| || |||||| | ||| || | ||| | | | | | Sbjct 1522667 TGTGGAGACCGATACCGCCGGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAGG-GTGTCG 1522725 Query 32334 AAGATGTTGGTGAGCGAGTCATCCA-CGTGG--ACAAGGAAACAGCTTGCAAGATTGGCA 32390 |||| | || |||||| ||| | ||| |||||||| || | | | || Sbjct 1522726 TAGATACCGTCGATCGAGTCCTCCTTCATGGCGACAAGGAAGCACGACGACATCTGGGGG 1522785 Query 32391 TTTCTGAACCCTGCATTGAACAGGGTCGGGCTCGCATGCGTGAACTTGCGCTTGGAAA-G 32449 || | || || ||||| ||||| || || || ||||| | ||||| || | | Sbjct 1522786 TTGGGGGTACCAGCGTTGAAGAGGGTAGGCGAGGCGTGGGTGAAGTAGCGCTCCGACATG 1522845 Query 32450 AGCATCGTAGGTTTCCTTCACCTTCGCGATGTCTTCTCCCCAGAGAGCGATCGCCACGCG 32509 || | ||| || || | ||||| | |||| || || || | |||||| |||||| Sbjct 1522846 AGGTT-GTAAGTCTCAATGACCTTGTCAATGTTGTCGCCGTGGATACCGATCGACACGCG 1522904 Query 32510 CAAATACGTGTGCTGGGGGCGCTCTACGACCTTGCCATCCACCTTGGTCAGGTAGAGGCG 32569 || | |||||||||| ||||| |||||||||| || | | ||||| ||| Sbjct 1522905 CATGATCATGTGCTGGGGACGCTCGGCGACCTTGCCGTCGATGCGGAGGAGGTACGAGCG 1522964 Query 32570 CTTCATGGTTGAGAAGCCAAAGTAGTCAAAGTCATAGTCGCGGTCGTA 32617 || | ||| |||||||||||||| | || | ||||||||||||| Sbjct 1522965 CTCAAGGGTCTTGAAGCCAAAGTAGTTATAGCTAAAGTCGCGGTCGTA 1523012 Score = 111 bits (122), Expect = 3e-19 Identities = 179/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 225377 GACAGGTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAG 225436 ||||||||||| || | | |||||| |||| |||||| || | ||| | | Sbjct 5914569 GACAGGTTTCCCTTGTAGTATGCGAGCTTC---TTCTGCTCGTAGTGGATAATGTCGGTA 5914625 Query 225437 CACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGG 225496 || || ||| ||||||||||||||||| || || || ||| | | ||| | || ||| Sbjct 5914626 CAGACATTGTCGAGGAAGCCAGAGTCGTGCGAGACGATCATGCAGGTCACTTCCGAGAGG 5914685 Query 225497 CCCTTGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCG 225556 | ||||||| | ||||||||| ||| | |||||| | ||||| ||||| || Sbjct 5914686 CTGTTGAGGTAGCTCTCGAGCCATGCGACGGTCTGGACGTCGAGATGGTTGGTAGGCTCA 5914745 Query 225557 TCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTC 225616 || || || || ||||| ||| | ||||| || || |||| || |||||||| ||| Sbjct 5914746 TCGAGCAGAAGAATGTCGGCACCGATGAGCATCGCACGCGCAAGCTCGAGCTTCATCTTC 5914805 Query 225617 CAGCCCCCGGACAGGGA 225633 || || || || || || Sbjct 5914806 CAACCACCCGAGAGCGA 5914822 Score = 84.2 bits (92), Expect = 4e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || ||||||||||||||||| || ||| |||| ||||| | | || |||||||| Sbjct 5914167 TAACGCCACTGGATGTACTGCACGGCAGTCTTGTCGAGGTGCTGGTTGATGTGGTGGAAC 5914226 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || ||||| || || || | | || | ||| ||||| ||| | ||| | Sbjct 5914227 GCGTGCTGCGCAACATAACCGACACGGAGAGCGGGGTGCTTGTGCACGGTACCCTCCTGC 5914286 Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCC 225156 || | ||||||||| |||| ||||||||| || | |||||| ||||| |||||||| Sbjct 5914287 GGGACGGTCTCGCCGGTCAGGAGCTTGATGAGAGTCGACTTGCCGGCACCGTTGGGGCC 5914345 >seq3 Length=3222897 Score = 163 bits (180), Expect = 5e-35 Identities = 674/1044 (65%), Gaps = 47/1044 (5%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || ||||| | ||||||| | ||| ||| ||| ||||| | ||||| ||||||||| Sbjct 992940 TAACGCCAGAGCATGTACTCGAGGGGAGTCGAGTCGAGGTGCTGGTCAATGTGGTGGAAA 992999 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCC--CCGAG 225095 || |||||||| ||||| | ||| | ||| || |||||||| || | || || | Sbjct 993000 GCGTGCTGGGCAACGTAACCAATGACGAGGTTAGGGTGCTTCCAGACGGTACCGCCCTTG 993059 Query 225096 TCGGT-TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGG 225154 | || | | ||||||||| |||| ||||| ||| || | ||| || | ||| ||||| Sbjct 993060 TTGGGCTCAGTCTCGCCGGTAAGGAGCTTGACGAGGGTCGACTTTCCGGAACCGTTGGGA 993119 Query 225155 CCAATCACGCCAATCCGGGATGACATTGCAACCTGC---GAGTTCACGT-----TGCTGA 225206 || | | | | | || || || | | |||||| || | ||| ||||| Sbjct 993120 CCGAGAATGGCGACACGCGACGAGAGCGAGACCTGCAGCGAAATGTCGTAGAGCTGCTGG 993179 Query 225207 AGATCTCAGGGCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGT 225266 | ||||| |||| |||| || | ||| |||| ||| | || | | Sbjct 993180 A-----CAGGGGCAGTGGGGTACTGGAACGAGACGTTGCGCATCTTGAGGAGCGACTTCT 993234 Query 225267 CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTG--GTCACCGC 225324 |||||| | | ||| || || | || ||||||| || ||||| ||| | | Sbjct 993235 CCTTGGTCTTGACACCATCAAGAAGAGGAGGGTCGGGGAGCTTGAACTTGTAGTCCTCTC 993294 Query 225325 GTCCTTCAGG-TCGTAGTAAGATGCAGCCTCGGGTCGCT--TTGCCACGAAAGCAGACAG 225381 | ||| | | | |||| | |||||||| | ||| |||||||| || Sbjct 993295 CGACGTCAAGCTGGAAGTAGGCACGGGCCTCGGGAACGTGGTTG--ACGAAAGCGTCAAG 993352 Query 225382 GTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACAC 225441 ||| ||| ||| | | ||||||| ||| || || |||| | || | Sbjct 993353 GTTGCCGGGGTAGCGCTTAAGCTTGAAGTTGTTGATGTGGAGAAC----GTCGGTGATGG 993408 Query 225442 TGCG-TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCT 225500 |||| | ||||||| | |||||||| || || ||||| || | | || | || Sbjct 993409 TGCGGTTAAGGAAGTCCGAGTCGTGCGAGACCATGATCGAGGTGCAGGTCTTGAGCGAGG 993468 Query 225501 TGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCA 225560 |||||| ||||||||| | |||||| |||||| | |||||| || || ||||| | Sbjct 993469 TGAGGTAGTCGATGAGCCAGGTGACGTTGACGACGTCGAGGTGGTTAGTGGGCTCGTCGA 993528 Query 225561 GAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGC 225620 | || || ||||| ||| | ||||||||| |||| || | |||||||| ||||| | Sbjct 993529 GGAGGAGAATGTCGGCACGGAAGAGGATGGCACGCGCAAGGGCGAGCTTCATCTTCCAAC 993588 Query 225621 CCCCGGACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGA 225680 | ||||| || || ||||| || ||||| | ||||| |||||| | | || Sbjct 993589 CACCGGAGAGCGAACCGATGGAGTGCTTCTGCTTCTCCTCGTCGAAGCCGACCGACTCGA 993648 Query 225681 GCGTCTGGATAATGCGCTCGGGAG-AGCTGCGAGCGGCAACGTTGGGGTC--GGACGAGA 225737 | ||| | || |||||| | ||| ||| || ||| | |||| | Sbjct 993649 GAGTCGACTTGATCTCCTCGGGGGTAGCAAGGAGACGC----TTGTCACCAAGGACCC-A 993703 Query 225738 GGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCG 225797 | || || | | || ||| |||| ||||||||||||| | ||||| | | Sbjct 993704 GTCGATGATGGA-GATCGACTCCT---CAGAGCCGTCAATGTCGTGCTGGACGTAGAAGG 993759 Query 225798 TCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCA 225857 | |||| ||| || | |||||||||||||| | |||| || |||| || | | Sbjct 993760 TGCGGACCTGCGAGGGGTCGGGGAAGCCCTCAACCTGGTTGTTGACAATGGCGTTCATGA 993819 Query 225858 GGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGT 225917 | || |||||| | ||||| | || | ||| ||||| | | || ||||||| Sbjct 993820 GCGTCGACTTGCCGGTACCGTTACGGCCAAGGAGACCGTAGCGGTGGCCACGCTTGAGAC 993879 Query 225918 TGAGG--CGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCG-CAA- 225973 |||| ||||| || || ||||||||| |||| ||||||||| ||||| | ||| Sbjct 993880 GGAGGTTGGCGTG--GTGGAGAAGGATCTTGGCACCGTAGGCAAGGTTGAACTGGTCAAT 993937 Query 225974 -TCGCACAGGTCCTCACCCTCCTC 225996 | ||| ||||||||||||||||| Sbjct 993938 GTTGCAGAGGTCCTCACCCTCCTC 993961 Score = 84.2 bits (92), Expect = 4e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 224507 AGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGC 224566 |||||||||||||| ||| |||| || ||||| || || ||| |||||||||| || Sbjct 992454 AGCGACTCGCGGTCGAGGTAGTTGGTGGGCTCGTCGAGACAGATGACGTGGGGGCGGCGC 992513 Query 224567 CACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGAT 224622 || ||| ||||||| || | ||| |||||||| || || ||||| || || || Sbjct 992514 CAGGTGGCGGCACCAAGGACGACCTTGACCTTCTGGCCACCCGAGAGACCACGCAT 992569 >seq9 Length=1289175 Score = 120 bits (132), Expect = 6e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 || || || || || | || || || | |||||| |||||||| ||||| | || ||| Sbjct 761760 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGG 761701 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 || || || ||||| |||||||| || ||||| ||||||||| ||||| ||||| | Sbjct 761700 TCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGAC 761641 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGAC 68449 || || || || | ||||||||| || || |||||||||||||| Sbjct 761640 GACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 761597 Score = 95.1 bits (104), Expect = 2e-14 Identities = 364/564 (65%), Gaps = 12/564 (2%) Strand=Plus/Minus Query 176127 GGGATGGTGGGAACATAGTATTCCGGTTCAATCCGGTCGCCGTCATCCTCGAGGTAGTTC 176186 || |||||||||| |||||| || || || ||| | ||| || || | |||||||| Sbjct 1226907 GGAATGGTGGGAAGATAGTACTCGGGCTCGATCTTCTGGCCATCTTCATTAAGGTAGTTG 1226848 Query 176187 AGCA-GACGCTCGTCGGCCTTGTGGAAAATATCCCGGGTGTTG--GGGGACAGTTGTGTG 176243 || | | || |||||||| |||||| || ||||| || |||||| |||| ||| Sbjct 1226847 AGAATGGCG-TCGTCGGCGGGGTGGAAGATCGTGCGGGTCATGCGGGGGAC-GTTG-GTG 1226791 Query 176244 AAGATATACCTAGCA---GACGCACTGTCCTTGCCTCCGTGAAGGCGGGAACCGAATTGT 176300 || ||||| | || | |||| ||||| || || || | ||| | |||||| || Sbjct 1226790 AAAATATAACGAGGGCTGGCCGCA---TCCTTTCCACCCTGCATGCGAGTACCGAACTGA 1226734 Query 176301 CCGCGAGGAAGAAGCAAATTGATGTTATTCGAACCCACGTAGTCTTGGGCCATTCCGACT 176360 ||| || || | |||||||| || || || |||| ||||| | || || Sbjct 1226733 CCGTTGGGCTCGAGAAGGTTGATGTTGTTGCTGCCGACATAGTTCTGGGCGAGACCAACA 1226674 Query 176361 ATGGCGCCCTGGAGAGACGCCTCGCCGTGGTGATAGCCGGCGTTCTCACTTGTGTATCCG 176420 || | | | | | || ||||||||||| || | | ||||| ||| || Sbjct 1226673 ATCGTGGACATCAAACTGGCTTCGCCGTGGTGGTATGCTGTCTTCTCCGAAACGTAACCA 1226614 Query 176421 GCAAACTGCGCGACTTTGATTTCTTGTACGAGGTTGCGCTTCAACGCCGAGAACAGAATC 176480 | | ||| ||||| |||||||| | ||||||||| || | ||||| | | Sbjct 1226613 CCGAGCTGGGCGACCTTGATTTCCTTCTTGAGGTTGCGTAAGAAGCAGGCGAACATGACC 1226554 Query 176481 TTCCGCTGCGAGGGCTTCAGACCATCGACGACCGACGGAATGGAACGCTCTACATCGTAT 176540 || ||||| ||||| || || ||| | ||||| || |||||||| |||| Sbjct 1226553 TTGCGCTGACCAGGCTTGAGGCCGTCGGCAACCGAGGGGATGGAACGAATGTTATCGGCC 1226494 Query 176541 CTTGAAAAAAGGATAAGGTCTTTGTTTATGAAATCCTCCACTGGAATCTTCGTGAGCTTC 176600 | || || ||||| || || ||||| | || |||| | || || || | | | Sbjct 1226493 ATGGAGAAGAGGATGAGCTCCTTGTTGACAAAGTCCTGAAGGGGGATGGTCTTAATGTCA 1226434 Query 176601 TGGTCGAGCTGGTTGCCAGGCTCGAAATCAAGGAGCCACGTCTTCCGTTCGTCCGCCCGA 176660 ||||| || | ||||||| | | | | |||||| ||| || ||||| ||| Sbjct 1226433 TGGTCAAGGAAAGTACCAGGCTTGTACTGGCGCAGCCACTCCTTGCGATCGTCGGCCTTC 1226374 Query 176661 GACTTGTTGAAAGACTTGTCAATG 176684 ||||||||| | | |||| ||| Sbjct 1226373 TTCTTGTTGAACGCCATGTCGATG 1226350 >seq4 Length=2551142 Score = 86.0 bits (94), Expect = 1e-11 Identities = 96/124 (77%), Gaps = 6/124 (5%) Strand=Plus/Plus Query 10253 GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCC 10312 ||| | |||||||||||| ||||| ||||||||| || ||| ||| |||||||||| Sbjct 1013395 GTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAAAACGTCAGGCCGCGCATGAGCCC 1013454 Query 10313 CCGGTTGCGCAGCCAGAAAATGG-CGCAGAACGACCCGGAGAACAGAAGA--CCCTCCAC 10369 || || |||||||| |||| |||| ||||| || |||| |||||| ||||| || Sbjct 1013455 GCGCTTCTTGAGCCAGAAGATGGCCGCA-AACGAGCCCGAGA--AGAAGATGCCCTCGAC 1013511 Query 10370 GCAC 10373 |||| Sbjct 1013512 GCAC 1013515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621996790200