Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03-
01] 35 sequences; 31,617,680 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq6 197 3e-45
seq1 181 2e-40
seq3 163 5e-35
seq9 120 6e-22
seq4 86.0 1e-11
>seq6
Length=1958011
Score = 197 bits (218), Expect = 3e-45
Identities = 180/227 (79%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||||||||| || | || | ||| || |||||||| || |||||||| || |||||
Sbjct 41897 CCTCCGCGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 41956
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| ||||| | || |||||||| |||
Sbjct 41957 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 42016
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||| | ||||||| ||||||||||| | || || ||
Sbjct 42017 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCGACC 42076
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || ||||||||||||||||| ||||||||
Sbjct 42077 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 42123
Score = 136 bits (150), Expect = 7e-27
Identities = 295/437 (68%), Gaps = 6/437 (1%)
Strand=Plus/Plus
Query 9937 TGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGA 9996
||||||||| ||| |||| |||| || || |||||||||||||| |||||||| ||
Sbjct 63065 TGACGCCCGACTTTGCGTACGCCGAAACACGCGACTCGAAGAAGTTGGCCTTGCCCTGGA 63124
Query 9997 GGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGA 10056
| || || | |||||| ||||| |||||||| | | || ||| || ||||
Sbjct 63125 GCGAGATCATCTCCATAAAGTCGAAGGGGTTGGTCGAGTAGTACGTCTTCTCGTTGCCGA 63184
Query 10057 GTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCA 10116
| || || | ||||| || || ||||| |||||||||| ||| || | | |||||
Sbjct 63185 GGGCGACGAGCAGACGGTCGGCGACAAACTCAATGTACTGGCACATGAGTCCGGCGTTCA 63244
Query 10117 TGCCAATCATGCG-GCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCT 10175
||||||||| ||| | ||||| || ||| | ||| |||| || | ||| ||
Sbjct 63245 TGCCAATCA-GCGAGACGGGGAGCGCCTCGGTGAGGAACTCCTGCTCAATCTTGACGGCC 63303
Query 10176 TCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGG 10235
|||| || || ||| | | ||| || | | | ||| | || | ||||
Sbjct 63304 TCCTTGATAATCTTCTCGATGAGGTCGGGGTGCGGGCGGCGGCGGAGGTGCGTAAACAGC 63363
Query 10236 AGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCC 10295
|| |||| | |||||| ||||||||||| |||| |||||| || ||
Sbjct 63364 AGGCAGGCAAAGTCGGTGTGGAGACCCTCGTCGCGCGAAATGAGCTCGTTCGAGAAGGTG 63423
Query 10296 AGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAAC 10355
|||||||||||||| || || || |||||||| |||| | ||||| || ||||
Sbjct 63424 AGACCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGA-- 63481
Query 10356 AGAAGA--CCCTCCACG 10370
|||||| ||||| |||
Sbjct 63482 AGAAGATGCCCTCGACG 63498
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| || || || | || | ||| || || ||||| || |||||||| || || |||
Sbjct 41669 CCTCCACGCAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 41728
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || || | || |||||||| ||
Sbjct 41729 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGG 41788
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| ||| ||| ||||| ||||| | || || ||
Sbjct 41789 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATCGTGTCCGACGACTCAACC 41848
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| || || || || | ||||||||||| ||||||||
Sbjct 41849 TCGAGCGTGATCGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 41895
>seq1
Length=6947394
Score = 181 bits (200), Expect = 2e-40
Identities = 180/233 (77%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | ||| || || ||||| || |||||||| || || ||
Sbjct 6691141 CCACCACGCAGGCGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 6691082
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| ||||| | || |||||||| ||
Sbjct 6691081 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGG 6691022
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| ||||||||| ||||| ||||| | || || ||
Sbjct 6691021 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 6690962
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCT 68467
|| | ||||||||| || |||||||||||||||||||| ||||||||| ||||
Sbjct 6690961 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATTTTGCT 6690909
Score = 118 bits (130), Expect = 2e-21
Identities = 1082/1728 (63%), Gaps = 45/1728 (3%)
Strand=Plus/Plus
Query 30920 CTGTGTCTGGTCAACAAACGGACCGCGGTCTGCTGCAAGGTCAATGACGGTCTTCATAGA 30979
||| | |||||| | || | || ||||| || |||||||||||||||| |||| ||
Sbjct 1521300 CTGCGACTGGTCGATGAAGGCTCCACGGTCGGCAGCAAGGTCAATGACGGCCTTCTGCGA 1521359
Query 30980 CAGCTCCCATGCGGTCTTGTAGATTGCCTTGAGCTCAGGGTGGATGCCAATGACACGTTG 31039
| |||||| ||||||||||||| ||||||| || | |||| ||| | | ||
Sbjct 1521360 AATCTCCCAGACGGTCTTGTAGATGGCCTTGATGTCGTCGGGGATACCAGGAATGTGCTG 1521419
Query 31040 GATGGACCCCCCGTTGGCAATAATCTGGTTCTTCATGGCCTCGGACCACGTGCCACGAGC 31099
|||||| || || ||||| | | | |||||| ||||| ||| ||| |
Sbjct 1521420 GATGGAACCACCCGAAGCAATGACGAGCTGCTTCATCTCCTCGTCCCAGAGACCAAGGTT 1521479
Query 31100 GATGAGGTCGCGCACGAGGTAGTTGTTGACCACAGGGAACTCTCCAGCAAGGGTCCGGCG 31159
||||||||| || | ||| || | ||| || |||| || || | || || ||
Sbjct 1521480 GATGAGGTCACGAAGGAGCCAGGGGCAGACGACCTGGAAGTCACCTGACAGAACACGACG 1521539
Query 31160 GCTGTACAGATTAGAAGTGATCGGCTCCATAGC-CTCTACGGACCCGCAGATTTGCGCGG 31218
||| || | || ||| ||||| | ||| ||| | ||| || |||| ||
Sbjct 1521540 CGAGTAGAGCATCGAGGTGTAGGGCTCGA-AGCACTCGTTCCAGCCGAGAATCTGCGAGG 1521598
Query 31219 TGGATGCGGTGGGCATCAGCGCGGTGGTCAGCGAATTCCTGACACCCTTCTTGACGCGCT 31278
| || ||||||||||| | || | ||||| || | |||||| | |||| || |
Sbjct 1521599 TCGAGGCGGTGGGCATAGGGGCAACGAGGAGCGAGTTGCGGACACCGTGCTTG--GCAAT 1521656
Query 31279 CTTCG-AGGG---TCTTCC-AGT--CAAGGCGAGTTACCGGCTCGGTTCCCCAGAGGTGA 31331
|||| | || || ||| ||| || | | || | ||||||| ||||||
Sbjct 1521657 CTTCTCACGGAGCTCGTCCCAGTTCCAGAGGTCGGTAGGAACGCGGTTCC--AGAGGTCG 1521714
Query 31332 TACTGCATCACACCACGAGACGCGGGAGACCCCTCAAAGGTAGGATGGGGACCGTGCTCT 31391
|||| | | || | || ||| || ||||| | | || | || || |||
Sbjct 1521715 AACTGAAGCTTGCCCTGCGAGATGGGCGAACCCTCGTACGAGGGGTAGGTGCCAGCCTCG 1521774
Query 31392 TCCGCGAGTTCGCAAGAGGCCTCCACCGCTGCAAAGTAAATATTCTCAAAGATTTCCCGG 31451
| || | || || || | ||| | || || ||| || |||| ||||| | ||
Sbjct 1521775 ACAGCCATCTCACACGACGACTCGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGGAGG 1521834
Query 31452 TTGAGGTTCTTGGCCGCGTCAGAGTCAAAAGGCATGCGCAGCTTGAAGAACACGTCCTGA 31511
||||| | || ||| ||||| || |||||||| || | ||| ||| |
Sbjct 1521835 TTGAGCTGACGAGCAGCGGGCGAGTCGAAGGGCATGCGGAGAGCCATGAAGGTGTCGGCA 1521894
Query 31512 AGACCCTGGACACCCACTCCAATTGGGCGCCGGCGCATGTTACTAGTCTTCG--CCTCGG 31569
|||||||||||||| | |||| ||||| | |||||||| | ||| | || ||||||
Sbjct 1521895 AGACCCTGGACACCGAGACCAACGGGGCGGTGACGCATGTT-CGAGT-TGCGGGCCTCGG 1521952
Query 31570 GAATTGCGTAGGACATGACGTCA-ATGCTCTTGTCGAGGTTCTTGGCCAGAATCTTCACG 31628
| | | |||| | || || | ||| |||||||||||||| | | ||| |
Sbjct 1521953 GGACGGGGTAGTAGTTG-CGCGAGATGACACAGTCGAGGTTCTTGGTGACGACCTTGGTG 1522011
Query 31629 TGCTTGCGAAGGTCCTCAAAGTCGTAGGCACCGTTCTTGACGT------AGTTCTGGAGG 31682
|| | | || | || |||||||||| ||||| | || || ||||
Sbjct 1522012 ATCTCGTGGAGCTTCTTGAAGTCGTAGGTGTTGTTCTCAAAGTCGACAAAGGCAGGGAGA 1522071
Query 31683 ACGATGCTTCCAATGACACACACCGCCGTTTCGTCCGTAGAAGTGTATTCGACAATCTCG 31742
|||| ||| | || || || ||||| | ||||| ||| || | |||||
Sbjct 1522072 GCGATCGAGGCAAGGTTGCAGACGGCAACCTCGTCGGGAGAAGAGTACTCAATGATCTCA 1522131
Query 31743 GCACAAAGATTGCTGCCCGTGATGGTGCCGGCATTGGACTGCATGTTC---TTCACGTTC 31799
| || || ||| | ||||||| || || | |||| |||| || |||
Sbjct 1522132 GTGCAGAGGTTGGACGACTTGATGGTACC--CAGGTG-CTGCTGGTTCGACTTGCGGTTG 1522188
Query 31800 ACGCTGTCCTTGTTGAGCACGTAAGGCATGCCCGTCTCGATCTGCGTGATGATCATCGCA 31859
|| |||||||| ||||| | | || || ||||| |||| | | || |
Sbjct 1522189 GCGGCGTCCTTGTAGAGCATGAAGGGGCCACCAGTCTCTGTCTGGGCCTCAAGGATGGAG 1522248
Query 31860 TTCCAGACATCGCGCGCTTTGACGA-CTTTCTTCGCACGCCCCTCGGACTCGTAGCGAAG 31918
||||| | | || |||| | ||| | | | |||| ||| ||||||
Sbjct 1522249 AACCAGAGCTTCTGAGCCTTGATGGTCTTGCGACCCTTGCCC-TCGCGCTCGTACTTCTC 1522307
Query 31919 ATACAGGTCCTCGTACTCCTTGCCAAAGG-CATCGGTTAGACCGGGACACTCCTTGGGGT 31977
|| || |||| |||||| | | || | || | |||||||| ||||| |||
Sbjct 1522308 GTAGAGAGCCTCAAACTCCTC-CGAGTGGACGTCCGAGAGACCGGGGCACTCGGCAGGGC 1522366
Query 31978 CGAAGAGCGACCATGCGACATCGGCCTCTACTCGCTTCATGAACAGGTCGTTCAGCCACA 32037
| ||| | ||| || |||||||||| || ||||||||||| |||||| | ||| |
Sbjct 1522367 ACATGAGGGTCCAGTCGCCATCGGCCTCGACACGCTTCATGAAGAGGTCGGGGATCCAGA 1522426
Query 32038 TCGCGTAAAACAGATTCCTGGCGCGTTGGGTCTCCTCACCCTGGTTACGTCGGAGCAGCA 32097
||||| || || | | || || ||||| || ||||| ||||| |
Sbjct 1522427 GGGCGTAGAAGAGGTCACGAGCACGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGA 1522486
Query 32098 GGAAGTCCATGATGTCGGGGTGGTGGGGCTCGAGGTACACGGCGAAAGATCCCTTGCG-- 32155
||||||| | || ||||| ||| ||||| ||||| | ||| || | || |||
Sbjct 1522487 GGAAGTCGAAGACGTCGGCGTGCCAAGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCT 1522546
Query 32156 -GCGACCCCCCTGGTTTGCGTATGCAGATGTCGTGTCGTACACCTTCAGCATGGGTACGA 32214
| || ||||||| |||| || || | |||||| | |||||||| || |
Sbjct 1522547 TGTTGCCTCCCTGGTCGACGTAACGAGCAGTAGCGTCGTATGCACGGAGCATGGGGACAA 1522606
Query 32215 TGCCATCAGACTCGCCATTGGTCCCCTGGATCTTGGAACCACGGCCGCGAATGTCGCTCA 32274
| || | || | || ||||| || || | ||||| | | || |||| | |
Sbjct 1522607 TACCGTTCGAGTAACCGTTGGTACCGGCAATGTACGAACCCTTGGCACGGATGTTGTGGA 1522666
Query 32275 GGTGCAGGCCGATGCCGCCACCAAACTTGGAAAGCTGTGCA-ACGTCACCAAGAGACTTG 32333
||| || ||||| ||||| || |||||| | ||| || | ||| | | | | |
Sbjct 1522667 TGTGGAGACCGATACCGCCGGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAGG-GTGTCG 1522725
Query 32334 AAGATGTTGGTGAGCGAGTCATCCA-CGTGG--ACAAGGAAACAGCTTGCAAGATTGGCA 32390
|||| | || |||||| ||| | ||| |||||||| || | | | ||
Sbjct 1522726 TAGATACCGTCGATCGAGTCCTCCTTCATGGCGACAAGGAAGCACGACGACATCTGGGGG 1522785
Query 32391 TTTCTGAACCCTGCATTGAACAGGGTCGGGCTCGCATGCGTGAACTTGCGCTTGGAAA-G 32449
|| | || || ||||| ||||| || || || ||||| | ||||| || | |
Sbjct 1522786 TTGGGGGTACCAGCGTTGAAGAGGGTAGGCGAGGCGTGGGTGAAGTAGCGCTCCGACATG 1522845
Query 32450 AGCATCGTAGGTTTCCTTCACCTTCGCGATGTCTTCTCCCCAGAGAGCGATCGCCACGCG 32509
|| | ||| || || | ||||| | |||| || || || | |||||| ||||||
Sbjct 1522846 AGGTT-GTAAGTCTCAATGACCTTGTCAATGTTGTCGCCGTGGATACCGATCGACACGCG 1522904
Query 32510 CAAATACGTGTGCTGGGGGCGCTCTACGACCTTGCCATCCACCTTGGTCAGGTAGAGGCG 32569
|| | |||||||||| ||||| |||||||||| || | | ||||| |||
Sbjct 1522905 CATGATCATGTGCTGGGGACGCTCGGCGACCTTGCCGTCGATGCGGAGGAGGTACGAGCG 1522964
Query 32570 CTTCATGGTTGAGAAGCCAAAGTAGTCAAAGTCATAGTCGCGGTCGTA 32617
|| | ||| |||||||||||||| | || | |||||||||||||
Sbjct 1522965 CTCAAGGGTCTTGAAGCCAAAGTAGTTATAGCTAAAGTCGCGGTCGTA 1523012
Score = 111 bits (122), Expect = 3e-19
Identities = 179/257 (70%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 225377 GACAGGTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAG 225436
||||||||||| || | | |||||| |||| |||||| || | ||| | |
Sbjct 5914569 GACAGGTTTCCCTTGTAGTATGCGAGCTTC---TTCTGCTCGTAGTGGATAATGTCGGTA 5914625
Query 225437 CACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGG 225496
|| || ||| ||||||||||||||||| || || || ||| | | ||| | || |||
Sbjct 5914626 CAGACATTGTCGAGGAAGCCAGAGTCGTGCGAGACGATCATGCAGGTCACTTCCGAGAGG 5914685
Query 225497 CCCTTGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCG 225556
| ||||||| | ||||||||| ||| | |||||| | ||||| ||||| ||
Sbjct 5914686 CTGTTGAGGTAGCTCTCGAGCCATGCGACGGTCTGGACGTCGAGATGGTTGGTAGGCTCA 5914745
Query 225557 TCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTC 225616
|| || || || ||||| ||| | ||||| || || |||| || |||||||| |||
Sbjct 5914746 TCGAGCAGAAGAATGTCGGCACCGATGAGCATCGCACGCGCAAGCTCGAGCTTCATCTTC 5914805
Query 225617 CAGCCCCCGGACAGGGA 225633
|| || || || || ||
Sbjct 5914806 CAACCACCCGAGAGCGA 5914822
Score = 84.2 bits (92), Expect = 4e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037
|| ||||||||||||||||| || ||| |||| ||||| | | || ||||||||
Sbjct 5914167 TAACGCCACTGGATGTACTGCACGGCAGTCTTGTCGAGGTGCTGGTTGATGTGGTGGAAC 5914226
Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097
|| ||||| || || || | | || | ||| ||||| ||| | ||| |
Sbjct 5914227 GCGTGCTGCGCAACATAACCGACACGGAGAGCGGGGTGCTTGTGCACGGTACCCTCCTGC 5914286
Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCC 225156
|| | ||||||||| |||| ||||||||| || | |||||| ||||| ||||||||
Sbjct 5914287 GGGACGGTCTCGCCGGTCAGGAGCTTGATGAGAGTCGACTTGCCGGCACCGTTGGGGCC 5914345
>seq3
Length=3222897
Score = 163 bits (180), Expect = 5e-35
Identities = 674/1044 (65%), Gaps = 47/1044 (5%)
Strand=Plus/Plus
Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037
|| ||||| | ||||||| | ||| ||| ||| ||||| | ||||| |||||||||
Sbjct 992940 TAACGCCAGAGCATGTACTCGAGGGGAGTCGAGTCGAGGTGCTGGTCAATGTGGTGGAAA 992999
Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCC--CCGAG 225095
|| |||||||| ||||| | ||| | ||| || |||||||| || | || || |
Sbjct 993000 GCGTGCTGGGCAACGTAACCAATGACGAGGTTAGGGTGCTTCCAGACGGTACCGCCCTTG 993059
Query 225096 TCGGT-TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGG 225154
| || | | ||||||||| |||| ||||| ||| || | ||| || | ||| |||||
Sbjct 993060 TTGGGCTCAGTCTCGCCGGTAAGGAGCTTGACGAGGGTCGACTTTCCGGAACCGTTGGGA 993119
Query 225155 CCAATCACGCCAATCCGGGATGACATTGCAACCTGC---GAGTTCACGT-----TGCTGA 225206
|| | | | | | || || || | | |||||| || | ||| |||||
Sbjct 993120 CCGAGAATGGCGACACGCGACGAGAGCGAGACCTGCAGCGAAATGTCGTAGAGCTGCTGG 993179
Query 225207 AGATCTCAGGGCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGT 225266
| ||||| |||| |||| || | ||| |||| ||| | || | |
Sbjct 993180 A-----CAGGGGCAGTGGGGTACTGGAACGAGACGTTGCGCATCTTGAGGAGCGACTTCT 993234
Query 225267 CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTG--GTCACCGC 225324
|||||| | | ||| || || | || ||||||| || ||||| ||| | |
Sbjct 993235 CCTTGGTCTTGACACCATCAAGAAGAGGAGGGTCGGGGAGCTTGAACTTGTAGTCCTCTC 993294
Query 225325 GTCCTTCAGG-TCGTAGTAAGATGCAGCCTCGGGTCGCT--TTGCCACGAAAGCAGACAG 225381
| ||| | | | |||| | |||||||| | ||| |||||||| ||
Sbjct 993295 CGACGTCAAGCTGGAAGTAGGCACGGGCCTCGGGAACGTGGTTG--ACGAAAGCGTCAAG 993352
Query 225382 GTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACAC 225441
||| ||| ||| | | ||||||| ||| || || |||| | || |
Sbjct 993353 GTTGCCGGGGTAGCGCTTAAGCTTGAAGTTGTTGATGTGGAGAAC----GTCGGTGATGG 993408
Query 225442 TGCG-TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCT 225500
|||| | ||||||| | |||||||| || || ||||| || | | || | ||
Sbjct 993409 TGCGGTTAAGGAAGTCCGAGTCGTGCGAGACCATGATCGAGGTGCAGGTCTTGAGCGAGG 993468
Query 225501 TGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCA 225560
|||||| ||||||||| | |||||| |||||| | |||||| || || ||||| |
Sbjct 993469 TGAGGTAGTCGATGAGCCAGGTGACGTTGACGACGTCGAGGTGGTTAGTGGGCTCGTCGA 993528
Query 225561 GAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGC 225620
| || || ||||| ||| | ||||||||| |||| || | |||||||| ||||| |
Sbjct 993529 GGAGGAGAATGTCGGCACGGAAGAGGATGGCACGCGCAAGGGCGAGCTTCATCTTCCAAC 993588
Query 225621 CCCCGGACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGA 225680
| ||||| || || ||||| || ||||| | ||||| |||||| | | ||
Sbjct 993589 CACCGGAGAGCGAACCGATGGAGTGCTTCTGCTTCTCCTCGTCGAAGCCGACCGACTCGA 993648
Query 225681 GCGTCTGGATAATGCGCTCGGGAG-AGCTGCGAGCGGCAACGTTGGGGTC--GGACGAGA 225737
| ||| | || |||||| | ||| ||| || ||| | |||| |
Sbjct 993649 GAGTCGACTTGATCTCCTCGGGGGTAGCAAGGAGACGC----TTGTCACCAAGGACCC-A 993703
Query 225738 GGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCG 225797
| || || | | || ||| |||| ||||||||||||| | ||||| | |
Sbjct 993704 GTCGATGATGGA-GATCGACTCCT---CAGAGCCGTCAATGTCGTGCTGGACGTAGAAGG 993759
Query 225798 TCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCA 225857
| |||| ||| || | |||||||||||||| | |||| || |||| || | |
Sbjct 993760 TGCGGACCTGCGAGGGGTCGGGGAAGCCCTCAACCTGGTTGTTGACAATGGCGTTCATGA 993819
Query 225858 GGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGT 225917
| || |||||| | ||||| | || | ||| ||||| | | || |||||||
Sbjct 993820 GCGTCGACTTGCCGGTACCGTTACGGCCAAGGAGACCGTAGCGGTGGCCACGCTTGAGAC 993879
Query 225918 TGAGG--CGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCG-CAA- 225973
|||| ||||| || || ||||||||| |||| ||||||||| ||||| | |||
Sbjct 993880 GGAGGTTGGCGTG--GTGGAGAAGGATCTTGGCACCGTAGGCAAGGTTGAACTGGTCAAT 993937
Query 225974 -TCGCACAGGTCCTCACCCTCCTC 225996
| ||| |||||||||||||||||
Sbjct 993938 GTTGCAGAGGTCCTCACCCTCCTC 993961
Score = 84.2 bits (92), Expect = 4e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 224507 AGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGC 224566
|||||||||||||| ||| |||| || ||||| || || ||| |||||||||| ||
Sbjct 992454 AGCGACTCGCGGTCGAGGTAGTTGGTGGGCTCGTCGAGACAGATGACGTGGGGGCGGCGC 992513
Query 224567 CACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGAT 224622
|| ||| ||||||| || | ||| |||||||| || || ||||| || || ||
Sbjct 992514 CAGGTGGCGGCACCAAGGACGACCTTGACCTTCTGGCCACCCGAGAGACCACGCAT 992569
>seq9
Length=1289175
Score = 120 bits (132), Expect = 6e-22
Identities = 125/164 (76%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345
|| || || || || | || || || | |||||| |||||||| ||||| | || |||
Sbjct 761760 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGG 761701
Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405
|| || || ||||| |||||||| || ||||| ||||||||| ||||| ||||| |
Sbjct 761700 TCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGAC 761641
Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGAC 68449
|| || || || | ||||||||| || || ||||||||||||||
Sbjct 761640 GACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 761597
Score = 95.1 bits (104), Expect = 2e-14
Identities = 364/564 (65%), Gaps = 12/564 (2%)
Strand=Plus/Minus
Query 176127 GGGATGGTGGGAACATAGTATTCCGGTTCAATCCGGTCGCCGTCATCCTCGAGGTAGTTC 176186
|| |||||||||| |||||| || || || ||| | ||| || || | ||||||||
Sbjct 1226907 GGAATGGTGGGAAGATAGTACTCGGGCTCGATCTTCTGGCCATCTTCATTAAGGTAGTTG 1226848
Query 176187 AGCA-GACGCTCGTCGGCCTTGTGGAAAATATCCCGGGTGTTG--GGGGACAGTTGTGTG 176243
|| | | || |||||||| |||||| || ||||| || |||||| |||| |||
Sbjct 1226847 AGAATGGCG-TCGTCGGCGGGGTGGAAGATCGTGCGGGTCATGCGGGGGAC-GTTG-GTG 1226791
Query 176244 AAGATATACCTAGCA---GACGCACTGTCCTTGCCTCCGTGAAGGCGGGAACCGAATTGT 176300
|| ||||| | || | |||| ||||| || || || | ||| | |||||| ||
Sbjct 1226790 AAAATATAACGAGGGCTGGCCGCA---TCCTTTCCACCCTGCATGCGAGTACCGAACTGA 1226734
Query 176301 CCGCGAGGAAGAAGCAAATTGATGTTATTCGAACCCACGTAGTCTTGGGCCATTCCGACT 176360
||| || || | |||||||| || || || |||| ||||| | || ||
Sbjct 1226733 CCGTTGGGCTCGAGAAGGTTGATGTTGTTGCTGCCGACATAGTTCTGGGCGAGACCAACA 1226674
Query 176361 ATGGCGCCCTGGAGAGACGCCTCGCCGTGGTGATAGCCGGCGTTCTCACTTGTGTATCCG 176420
|| | | | | | || ||||||||||| || | | ||||| ||| ||
Sbjct 1226673 ATCGTGGACATCAAACTGGCTTCGCCGTGGTGGTATGCTGTCTTCTCCGAAACGTAACCA 1226614
Query 176421 GCAAACTGCGCGACTTTGATTTCTTGTACGAGGTTGCGCTTCAACGCCGAGAACAGAATC 176480
| | ||| ||||| |||||||| | ||||||||| || | ||||| | |
Sbjct 1226613 CCGAGCTGGGCGACCTTGATTTCCTTCTTGAGGTTGCGTAAGAAGCAGGCGAACATGACC 1226554
Query 176481 TTCCGCTGCGAGGGCTTCAGACCATCGACGACCGACGGAATGGAACGCTCTACATCGTAT 176540
|| ||||| ||||| || || ||| | ||||| || |||||||| ||||
Sbjct 1226553 TTGCGCTGACCAGGCTTGAGGCCGTCGGCAACCGAGGGGATGGAACGAATGTTATCGGCC 1226494
Query 176541 CTTGAAAAAAGGATAAGGTCTTTGTTTATGAAATCCTCCACTGGAATCTTCGTGAGCTTC 176600
| || || ||||| || || ||||| | || |||| | || || || | | |
Sbjct 1226493 ATGGAGAAGAGGATGAGCTCCTTGTTGACAAAGTCCTGAAGGGGGATGGTCTTAATGTCA 1226434
Query 176601 TGGTCGAGCTGGTTGCCAGGCTCGAAATCAAGGAGCCACGTCTTCCGTTCGTCCGCCCGA 176660
||||| || | ||||||| | | | | |||||| ||| || ||||| |||
Sbjct 1226433 TGGTCAAGGAAAGTACCAGGCTTGTACTGGCGCAGCCACTCCTTGCGATCGTCGGCCTTC 1226374
Query 176661 GACTTGTTGAAAGACTTGTCAATG 176684
||||||||| | | |||| |||
Sbjct 1226373 TTCTTGTTGAACGCCATGTCGATG 1226350
>seq4
Length=2551142
Score = 86.0 bits (94), Expect = 1e-11
Identities = 96/124 (77%), Gaps = 6/124 (5%)
Strand=Plus/Plus
Query 10253 GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCC 10312
||| | |||||||||||| ||||| ||||||||| || ||| ||| ||||||||||
Sbjct 1013395 GTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAAAACGTCAGGCCGCGCATGAGCCC 1013454
Query 10313 CCGGTTGCGCAGCCAGAAAATGG-CGCAGAACGACCCGGAGAACAGAAGA--CCCTCCAC 10369
|| || |||||||| |||| |||| ||||| || |||| |||||| ||||| ||
Sbjct 1013455 GCGCTTCTTGAGCCAGAAGATGGCCGCA-AACGAGCCCGAGA--AGAAGATGCCCTCGAC 1013511
Query 10370 GCAC 10373
||||
Sbjct 1013512 GCAC 1013515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621996790200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |