Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03- 01] 35 sequences; 31,617,680 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 6e-12 >seq4 Length=2551142 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 138377 CAAGCACGCAAAGTTGGTGTGTAAACCTTCGTCGCGAGAGATAAGTTCGTTGCTAAACGT 138436 || ||| ||||||| |||||| | || |||||||| ||||| || |||||| |||||| Sbjct 1013377 CAGGCATGCAAAGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAAAACGT 1013436 Query 138437 CAGCCCCGGCATGACGCCTTTGGTCTTGATGTAAAAGATGGCCGCGAAACTGCCCGaaaa 138496 ||| || |||||| || |||||| | ||||||||||| || |||||| || Sbjct 1013437 CAGGCCGCGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCAAACGAGCCCGAGAA 1013496 Query 138497 aaaaaCGCCTTCGAC 138511 || | ||| ||||| Sbjct 1013497 GAAGATGCCCTCGAC 1013511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003002248600