Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03-
01] 35 sequences; 31,617,680 total letters
Query= NC_019405.1
Length=215710
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 2e-19
>seq2
Length=4354190
Score = 111 bits (122), Expect = 2e-19
Identities = 172/242 (71%), Gaps = 9/242 (4%)
Strand=Plus/Plus
Query 82027 AGGATGACCTTGACCTCGCCGGTGTAGTCCTCGTCCACCACGCCGGCCAGGACCCCGATG 82086
|||| |||||||||||||||| |||||| |||| || ||||| || ||| |||
Sbjct 3288428 AGGACGACCTTGACCTCGCCGCGGTAGTCGGCGTCAACTACGCCCGCGCCGACATTGATA 3288487
Query 82087 CC---CTTGACGCCCAGGCCCGAGCGCGGCGCGACGCGGGCATAGGTTCCCTCGGGCGCG 82143
|| |||| || ||||||||||||||||||||| |||| | || || ||| | ||| |
Sbjct 3288488 CCGTGCTTGGCGGCCAGGCCCGAGCGCGGCGCGATGCGGCCGTACGTGCCCGCCGGCACC 3288547
Query 82144 GTGATCGAGAGGCCCGTCGACAGCAGGGCGCGATCGCCGGGGTTCAGGCGCACTGTCGTC 82203
| || | || |||||| | |||| |||| ||| | | || || || |||| |
Sbjct 3288548 GCGACGGCGATCTGCGTCGAGACCAGGTCGCGCCCGCGTGCGGGCA-GCACAATGTC--C 3288604
Query 82204 TCGCCGTCGTAATAGACGTCCAGGCCGGCGGCCTTGGGCGAGCCCCGCGTCGGGAGCTTG 82263
||| || || || | ||| ||| || | | ||||||||| |||||||||| | ||
Sbjct 3288605 TCGGCGGCG---TACAGGTCGTAGCCAGCCGACAGGGGCGAGCCGCGCGTCGGGACCGTG 3288661
Query 82264 GC 82265
||
Sbjct 3288662 GC 3288663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 690143698062000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |