Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03- 01] 35 sequences; 31,617,680 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq6 192 7e-43 seq1 163 3e-34 seq4 138 1e-26 seq2 118 1e-20 seq11 95.1 1e-13 seq3 91.5 2e-12 >seq6 Length=1958011 Score = 192 bits (212), Expect = 7e-43 Identities = 241/327 (74%), Gaps = 3/327 (1%) Strand=Plus/Plus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 |||| || ||| |||||| | || ||| |||||| ||||||| |||||||| ||| Sbjct 63066 GACGCCCGACTTTGCGTACGCCGAAACACGCGACTCGAAGAAGTTGGCCTTGCCCTGGAG 63125 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAG 868803 |||||||| |||||| | ||| ||||||| || | ||| ||| ||| ||||| Sbjct 63126 CGAGATCATCTCCATAAAGTCGAAGGGGTTGGTCGAGTAGTACGTCTTCTCGTTGCCGAG 63185 Query 868804 CGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCAT 868863 | ||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 63186 GGCGACGAGCAGACGGTCGGCGACAAACTCAATGTACTGGCACATGAGTCCGGCGTTCAT 63245 Query 868864 GCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923 ||| || |||| || || |||| |||| | | ||||| | ||| |||| ||||||||| Sbjct 63246 GCCAATCAGCGAGACGGGGAGCGCCTCGGTGAGGAACTCCTGCTCAATCTTGACGGCCTC 63305 Query 868924 GACGATGATCTGCCTGGGCACGTC-GGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCA 868982 ||| |||| | | | ||| || | |||| | | ||| ||| | |||| Sbjct 63306 CTTGATAATCTTCTCGATGAGGTCGGGGTGCGGGC-GGCGGCGGAGGTGCGTAAACAGCA 63364 Query 868983 GGCAGGCAAAGTCGCAGTGCA-ACCCT 869008 |||||||||||||| ||| | ||||| Sbjct 63365 GGCAGGCAAAGTCGGTGTGGAGACCCT 63391 Score = 158 bits (174), Expect = 1e-32 Identities = 192/262 (73%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 18221 CCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCA 18280 || ||| |||| |||| ||| ||| | ||||||||||||| ||| | ||| | | Sbjct 1114812 CCTCGCAGCGCTCCGAGTTCGACACTGTCCACCTCCAGTCGGGCACCGAGCATGGCGTGA 1114753 Query 18281 CGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATT 18340 |||||||| |||| ||||||| | ||| ||| |||||||| || |||||| Sbjct 1114752 CGCTCGGCACGCCGATCGGCCTGCTCGTGCAGAACAAGGACCAGCGTCCGCACGACTACA 1114693 Query 18341 CCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACG 18400 |||| | | | | ||||| || || |||||||||||||| ||| |||| ||||||| Sbjct 1114692 CCGAGACGGACCTGTACCCGCGCCCGTCGCACGCCGACTACACGTACCTGGCAAAGTACG 1114633 Query 18401 GCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCG 18460 || ||||||||||||| ||||| || || |||| || |||||||| | ||||||| Sbjct 1114632 GCGTCAAGGCGTCGTCTGGCGGCGGACGCGCGTCGGCGCGCGAGACGATTGGCCGCGTCG 1114573 Query 18461 CCGCCGGCGCGGTCGCCGAGAA 18482 | ||||| ||| | || ||||| Sbjct 1114572 CTGCCGGAGCGATTGCGGAGAA 1114551 Score = 136 bits (150), Expect = 5e-26 Identities = 170/232 (73%), Gaps = 7/232 (3%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| |||||||| || | ||||| |||| ||| |||||||||||||||||||| Sbjct 63387 ACCCTCGTCGCGCGAAATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGGCCGCGCTT 63446 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | || ||||||||| ||||||||||||||||||||||| Sbjct 63447 CTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCAAA 63506 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCC--CTCCTTGTTGATCCACTTCATCGCC 869356 | || || ||||| ||||| ||| | | ||| | |||||| || |||| Sbjct 63507 CGCAATCAGACGCTCAGCAAA-----CGAAGACTTCTCGTCCGAGATCCAGCGCAGCGCC 63561 Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT 869408 ||||||||||| ||| | | |||| | | || |||||| ||||||| Sbjct 63562 CAGTCGGCCTTCTTCTTGATGCACGGAATGTTCTCAATGGCGTTGAAGAGGT 63613 Score = 120 bits (132), Expect = 4e-21 Identities = 112/140 (80%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 19054 TCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCA-GGCCTCGGCGAGCCGTGC 19112 ||||||||||||| ||||| ||| |||||| |||| | || ||||||||||| Sbjct 1114317 TCGGCGGCACGGTCACGTGTGTGATCCGCAAC-TGCCCCCTCGGTCTCGGCGAGCCCGCG 1114259 Query 19113 TTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGA 19172 || |||||| ||||||||| |||||| ||||||||||| ||||||||| | |||||||| Sbjct 1114258 TTCGACAAGCTCGAGGCCGTGCTCGCGCACGCCATGCTCTCGATCCCGTCGACCAAGGGC 1114199 Query 19173 TTCGAGATTGGCAGCGGGTT 19192 || ||||| || |||||| Sbjct 1114198 TTTGAGATCGGGTCCGGGTT 1114179 Score = 109 bits (120), Expect = 7e-18 Identities = 118/154 (77%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 19580 GTGGCCTTTAAGCCGCCGGCCACGATCGGCTCCGCGCAGCAGACGTGCGAA-TACGGCGG 19638 || || || |||||||| || |||||| |||||||||||| ||| | ||| || Sbjct 1114033 GTCGCGTTCAAGCCGCCCGCGACGATCTCGCAGGCGCAGCAGACG-GCGCAGTACTCTGG 1113975 Query 19639 CGAGCAGGCCACGTTGGAGGCGCGCGGGAGGCACGACCCGTGCGTCGTCGCGCGCGCGGT 19698 |||| | | |||| | | |||||||| | ||||||||||||||||| | ||||| || Sbjct 1113974 CGAGGACGGCACGCTTGCCGCGCGCGGCCGCCACGACCCGTGCGTCGTGCCCCGCGCCGT 1113915 Query 19699 CCCCATCGTCGAGGCCATGGCGGCCATGGTCCTC 19732 |||||| ||||| ||||||||||||| ||| || Sbjct 1113914 GCCCATCATCGAGACCATGGCGGCCATCGTCATC 1113881 Score = 95.1 bits (104), Expect = 1e-13 Identities = 108/142 (76%), Gaps = 5/142 (4%) Strand=Plus/Plus Query 869743 GGCGGCGAAAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACA- 869801 ||| || || || || |||||||||| |||||||| |||||||| |||| | ||| Sbjct 63918 GGCAGCAAAGAAGGCGAGGACGTGCTCGATAAAGTAGCGCTCGTTGTCGTTCAGCTTGTT 63977 Query 869802 --CCCAGTGGACGGTGTCGG-CGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCT 869858 |||||| | | ||||| ||| ||||| | ||||||||||||||||| |||||||| Sbjct 63978 GTCCCAGTCGTGGAGGTCGGGCGC-GAGGTTGATCTCCTCGGCGGTCCAGAACGAGGCCT 64036 Query 869859 CGGCCTTTTTGTACATCTCCCA 869880 ||||| ||||| | || ||| Sbjct 64037 GCGCCTTCTTGTAGAACTGCCA 64058 >seq1 Length=6947394 Score = 163 bits (180), Expect = 3e-34 Identities = 319/470 (68%), Gaps = 15/470 (3%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||||||||| || || || ||| | | ||||||||||| || | ||||| || Sbjct 1522557 CTGGTCGACGTAACGAGCAGTAGCGTCGTATGCACGGAGCATGGGGACAATACCGTTCGA 1522616 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | |||||||| || || | ||| | || ||| || | ||||| | | || Sbjct 1522617 GTAACCGTTGGTACCGGCAATGTACGAACCCTTGGCACGGATGTTGTGGATGTGGAGACC 1522676 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| |||||||| | ||||||||| | ||||| ||||| ||||||||||| || || Sbjct 1522677 GATACCGCCGGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTC 1522736 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||||||||| |||||||| | || || ||||||||||| | || |||| | || || Sbjct 1522737 GATCGAGTCCTCCTTCATGGCGACAAGGAAGCACGACGACATCTGGGGGTTGGGGGTACC 1522796 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||||| || |||| || |||||| | || ||||||| || ||| || Sbjct 1522797 AGCGTTGAAGAGGGTAGGCGAGGCGTGGGTGAAGTAGCGCTCCGACATGAGGTTGTAAGT 1522856 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | | || | | || | | ||| ||| | ||| ||||| | || Sbjct 1522857 CTCAATGAC-CTTGTCAATG--TTGTCGCCGTGG--------ATA----CCGATCGACAC 1522901 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484 |||||||| ||||| |||||| |||||| |||| |||| | | ||||| || Sbjct 1522902 GCGCATGATCATGTGCTGGGGACGCTCGGCGACCTTGCCGTCGATGCGGAGGAGGTACGA 1522961 Query 1630485 CCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGT 1630534 || | |||| ||| |||||||||| | || ||| |||||||||| Sbjct 1522962 GCGCTCAAGGGTCTTGAAGCCAAAGTAGTTATAGCTAAAGTCGCGGTCGT 1523011 Score = 159 bits (176), Expect = 4e-33 Identities = 320/480 (67%), Gaps = 6/480 (1%) Strand=Plus/Plus Query 1628124 GGAAAGGTTGCAAGTCGCCACTTCCGTGGGCGACGAAAACTGGACGATCTCGGTGCACAG 1628183 || ||||||||| || || || ||| || || ||| | |||||| ||||| || Sbjct 1522080 GGCAAGGTTGCAGACGGCAACCTCGTCGGGAGAAGAGTACTCAATGATCTCAGTGCAGAG 1522139 Query 1628184 GTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTCAGGTTGACGGCGTCCTT 1628243 ||||| |||| | | |||||||||| ||||||||| | | ||||| |||||||||| Sbjct 1522140 GTTGGACGACTTGATGGTACCCAGGTGCTGCTGGTTCGACTTGCGGTTGGCGGCGTCCTT 1522199 Query 1628244 GTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGATGGCCGACCAGATCTG 1628303 || ||||||| |||| | || ||||| |||| ||| | | ||||| |||||| || Sbjct 1522200 GTAGAGCATGAAGGGGCCACCAGTCTCTGTCTGGGCCTCAAGGATGGAGAACCAGAGCTT 1522259 Query 1628304 GCGCGCGGGCACGACAGTCC-GCGCGCG--GCCCTNNNNNNNNNNNNNNNNNNNNNNNNN 1628360 | || | || ||| ||| | ||||| Sbjct 1522260 CTGAGC---CTTGATGGTCTTGCGACCCTTGCCCTCGCGCTCGTACTTCTCGTAGAGAGC 1522316 Query 1628361 NTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGA 1628420 ||||| || | || | || || ||||| ||||| || || | ||| | Sbjct 1522317 CTCAAACTCCTCCGAGTGGACGTCCGAGAGACCGGGGCACTCGGCAGGGCACATGAGGGT 1522376 Query 1628421 CCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAA 1628480 |||||||||| ||| | | | || ||| |||||||| |||| || ||||| || Sbjct 1522377 CCAGTCGCCATCGGCCTCGACACGCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAA 1522436 Query 1628481 GAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGAC 1628540 |||||| || || || ||||||||||||||||||||| ||||||||| |||||| Sbjct 1522437 GAGGTCACGAGCACGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAGTCGAA 1522496 Query 1628541 AATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 | |||||||||||| ||||| |||||| ||||||||| || ||||||| ||| || Sbjct 1522497 GACGTCGGCGTGCCAAGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCTCC 1522556 Score = 143 bits (158), Expect = 3e-28 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||| |||||| | | ||| || || |||||||||||||||||||||| | || Sbjct 962556 GCTTGGACAGCTCGCCGGGGAGGATGAGACGGACGGCGGTCTGGATCTCGCGCGAGGAGA 962497 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||| | ||| | ||| || | ||||| ||| ||||||| |||| | Sbjct 962496 TGGTCGAGCGGTGGTTGTACGACGCGAGCTTGGACGCCTCAGTGGCGATGCGCTCGAAAA 962437 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||| || || ||||| | | | ||| | ||||||| ||| ||| |||||||| Sbjct 962436 TGTCGGAAACGAAAGAGTTGAGAATGGCCATGGCCTTGTTGCTGATTCCCGTGTCGGGGT 962377 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACG 1254561 | ||||||||||| |||||||||||| |||||||||||| Sbjct 962376 GGACCTGCTTGAGGACCTTGTAGATGTACGACGAGTACG 962338 Score = 132 bits (146), Expect = 6e-25 Identities = 172/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 1626984 GTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCGGT 1627043 |||||| || ||||| ||||||| ||| | || | ||||| || ||||| |||||||| Sbjct 1521159 GTCGACAGTGAACTGAATGGCGTTGGCCGAAGGACGCGTGCGGAGGTAGTAGATGCCGGT 1521218 Query 1627044 CTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCGTC 1627103 |||||| ||||| ||| ||||| ||||||||| |||| || | || || || Sbjct 1521219 CTTGAGACCGCGCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGCGAGAACGACGGGTT 1521278 Query 1627104 GGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGCCAT 1627163 |||| || | |||||||||||| |||||||| ||| | || ||||| || | Sbjct 1521279 GGCGAGGTGGATGTTGAGCGACTGCGACTGGTCGATGAAGGCTCCACGGTCGGCAGCAAG 1521338 Query 1627164 GTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGTCG 1627221 ||| ||| | || | | | |||||| ||||||||| |||||||||||| |||| Sbjct 1521339 GTCAATGACGGCCTTCTGCGAAATCTCCCAGACGGTCTTGTAGATGGCCTTGATGTCG 1521396 Score = 105 bits (116), Expect = 8e-17 Identities = 165/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 509036 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 509095 |||||| || |||||||| ||||||||| |||||| |||| | | ||| | Sbjct 1877140 CCCGAGGCGCGTGGCTTTGTCGAAAACTCGTACTTGCGCGGTCTCACGCCCCAAGAGTTC 1877081 Query 509096 TTTCTGCACATGATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCCGAG 509155 || | ||| || || || || ||||| || ||||||| ||||||||||| |||||| Sbjct 1877080 TTCTTCCACGCCATGGGAGGTCGTGAGGGTCTTATCGACACTGCCGTCAAGACCGCCGAG 1877021 Query 509156 ACGGGCTACATCCAGCGCCGGTGCATCAAGTCGATGGAGAGCCTGCAGATCAAGCGCGGC 509215 || || ||||||||||| || ||||| | |||||| ||| || || || | Sbjct 1877020 ACAGGTTACATCCAGCGTCGACTGGTCAAGGCCATGGAGGACCTCAAGGTCGGCTACGAC 1876961 Query 509216 GGCCTCGTGCGCAACGCCAACGGCGACATCGTCCAGTTTGCCTATGGCGGCGACGG 509271 ||| |||||||| | |||||||| ||| || |||| || |||| ||||| Sbjct 1876960 GGCACGGTGCGCAATTCGAACGGCGATATCATCGAGTTCCTGTACGGCGAGGACGG 1876905 Score = 95.1 bits (104), Expect = 1e-13 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 507714 TCAACCTGGCCGTCACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGC 507773 |||||||| ||||||| | ||||| |||||||| ||||| |||||||||||| ||| Sbjct 1878114 TCAACCTGTCCGTCACCTCGCCGTACAATGCCGACTTCGACGGTGACGAGATGAACTTGC 1878055 Query 507774 ACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGGTGACGCACACCATGAGCGTGTCGCTCA 507833 |||| || ||||| ||| | |||| || ||| || | || | | | || || Sbjct 1878054 ACGTTCCGCAGTCGGAGGAGACGCGTGCGGAGCTGTCCCAGATTGCGTGGGTCCCGAGGC 1877995 Query 507834 AGACCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGCCTGGTCATGGAC 507883 ||| | ||||| ||||||||||||||| |||| || | ||| |||| Sbjct 1877994 AGATTATCTCGCCCCAGGCCAACAAGCCCGTCATGGGTATCGTCCAGGAC 1877945 Score = 91.5 bits (100), Expect = 2e-12 Identities = 152/214 (71%), Gaps = 12/214 (6%) Strand=Plus/Plus Query 507599 GTCGAGCGCCACCTGCGCGCGGGCGACGCCGTGGTGATGAACCGGCAGCCGTCGCTGCAC 507658 ||| | |||||| |||| | |||||| || || | ||||| ||||||||||| ||| Sbjct 3114740 GTCCACCGCCACGTGCGTGATGGCGACATTGTCCTGTTCAACCGTCAGCCGTCGCTCCAC 3114799 Query 507659 ATGGGCTCCATGCTCATGCA-CAAGGTG---GTGCCCATGCCCGGGCGCACCATGCGATT 507714 | | ||| || |||| || ||| ||| || | ||| |||| || | || | Sbjct 3114800 AAGATCTCGAT---CATGTGTCACCGTGTCCGTGTCCGT-CCCTGGCGTACGCTCCGCCT 3114855 Query 507715 CAACCTGGCCGTCACGGGCACC--TACAACGCCGACTTTGACGGCGACGAGATGAACCTG 507772 ||| || || | ||| |||||||||||||| ||||| |||||||||||| || Sbjct 3114856 CAA--TGAGTGTGTGTGCAACCCGTACAACGCCGACTTCGACGGAGACGAGATGAACTTG 3114913 Query 507773 CACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGG 507806 ||||| |||||| ||||| |||||| |||||| Sbjct 3114914 CACGTTCCCCAGACCGAGGAGGCGCGTACCGAGG 3114947 >seq4 Length=2551142 Score = 138 bits (152), Expect = 1e-26 Identities = 132/169 (78%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 868681 CGAGACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTC 868740 ||| |||| ||| | |||| ||| ||||||| |||||||||||||| |||||||| Sbjct 1013032 CGATACGTTGGCCATCTGGTACGCGCTCACGCGCGACTCGAAAAAGTTGGCCTTGCCCTG 1013091 Query 868741 GAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC 868800 |||||||| | ||||||||| ||||||||||| | | |||| ||| ||| | || Sbjct 1013092 CAGCGAGATGAGCTCCATCCAGTCGAACGGGTTGGCAGAGTAGTAGATCTTGTCGTAGCC 1013151 Query 868801 GAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATG 868849 ||||| ||| || ||||| ||||||||||| ||||||||||||||| Sbjct 1013152 GAGCGCGACGACGAGACGGTCCGCGACAAACTCCATGTACTGGCACATG 1013200 Score = 102 bits (112), Expect = 1e-15 Identities = 96/120 (80%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | |||||| ||| | |||||| ||||||| ||||||||| Sbjct 1013402 CCCTCGTCGCGCGAGATGAGCTCGTTGGAAAACGTCAGGCCGCGCATGAGCCCGCGCTTC 1013461 Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 |||||||| ||||||| |||| || ||||||||| ||||||||||||||| ||||| Sbjct 1013462 TTGAGCCAGAAGATGGCCGCA-AACGAGCCCGAGAAGAAGATGCCCTCGACGCACGCAAA 1013520 >seq2 Length=4354190 Score = 118 bits (130), Expect = 1e-20 Identities = 178/246 (72%), Gaps = 9/246 (4%) Strand=Plus/Plus Query 1572506 TCGGCGTCGGTGTGGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATG 1572565 ||||||||| ||||||||||||| ||||| ||||||||||| |||||||| || | Sbjct 3288407 TCGGCGTCGTTGTGGTTGAAGAGGACGACCTTGACCTCGCCGCGGTAGTCGGCGTCAACT 3288466 Query 1572566 ACGCCTGCGCCGACGTCGATGCC---CCTGACGGCCAGGGACGAGCGCGGCGCCACGCGC 1572622 ||||| |||||||| | ||| || | || |||||||| |||||||||||| | ||| Sbjct 3288467 ACGCCCGCGCCGACATTGATACCGTGCTTGGCGGCCAGGCCCGAGCGCGGCGCGATGCGG 3288526 Query 1572623 CCATAGTAGCCCGCGGGTATGGCCACGGCCAGACCGGTG-CG-CACCTGCGCGCGGCCGC 1572680 || || |||||| || | || ||||| || | | | || ||| | |||| |||| Sbjct 3288527 CCGTACGTGCCCGCCGGCACCGCGACGGC--GATCTGCGTCGAGACCAGGTCGCGCCCGC 3288584 Query 1572681 GTGCCGGCACGGTCGTCGTCC-CGACAGCCCACAGATCGTATCCGGCGGCGCCTGGCGTG 1572739 |||| |||| | | |||| || | || |||| ||||| || || | |||| | Sbjct 3288585 GTGCGGGCA-GCACAATGTCCTCGGCGGCGTACAGGTCGTAGCCAGCCGACAGGGGCGAG 3288643 Query 1572740 CCGCGC 1572745 |||||| Sbjct 3288644 CCGCGC 3288649 >seq11 Length=1018449 Score = 95.1 bits (104), Expect = 1e-13 Identities = 105/138 (76%), Gaps = 8/138 (6%) Strand=Plus/Minus Query 1573968 GAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATC 1574027 |||| ||||||||| || ||||||||||||||||| || ||||||||||| | || | Sbjct 63443 GAGGGCGTGCTCGAGCTGAACGCGTCGGACGAGCGTGGTATCGACGTCGTGAGGAACAAG 63384 Query 1574028 ATCAAGCACCACGCCT-CCAAGAGGA---TCGACCTGCCGCCCGGACGCCACAAGGTGAT 1574083 |||||| || | || |||||| || |||||||| ||||| |||||| | || Sbjct 63383 ATCAAG----TCGTTTGCCCAGAGGAAGGTCACTCTGCCGCCTGGACGGCACAAGATCAT 63328 Query 1574084 CATCCTCGACGAGGCCGA 1574101 ||| ||||| ||||| || Sbjct 63327 CATTCTCGATGAGGCGGA 63310 Score = 86.0 bits (94), Expect = 8e-11 Identities = 194/287 (68%), Gaps = 21/287 (7%) Strand=Plus/Plus Query 96668 GATCGTCGACCTGGTGCGCAACGACCTGAGCGTGTGCTGCGCGCCCGGCAGCGTCGTCGT 96727 |||||| |||||| | ||| |||||| ||||||| |||| | ||| || Sbjct 812424 GATCGTGGACCTGATCCGCTCGGACCTGCTGTCCTGCTGCGTGCCCTCGACGGTCAAGGT 812483 Query 96728 GCCGCCCGGCCGCCTGATGGCGATTGAGACCTACGCCGCCGTGCACCAGATGGTGACCAC 96787 ||||| ||||| ||| | |||| ||||| || ||||| | | ||||| || Sbjct 812484 GCCGCAG------CTGATCGCGCTCGAGAGCTACGGCG---TGCACAACCTCGTGACGAC 812534 Query 96788 CGTCGACGGCCTGCTCGACCGCGGCCGGAC---GGCGC--TCGACCTCGTGC-GCGCGGC 96841 ||| ||| | ||||| |||| || ||||| |||| ||| |||| | Sbjct 812535 GGTCAGCGGGCAGCTCGC-----GCCGTACATTGGCGCCGTCGAGGCCGTCAAGCGCTGT 812589 Query 96842 CTTTCCGCCGGGCTCGATGACGGGCGCGCCCAAGGCGCGCAGCATGGAGATTCTCGATCG 96901 || |||||||| || ||||||||||| |||||| |||| | || || | || || Sbjct 812590 -TTCCCGCCGGGGTCCATGACGGGCGCACCCAAGCTGCGCTCCGTGCAGCTCCTGGACGA 812648 Query 96902 CCTCGAGAAGCACCGCCCGCGCGGGATCTACTCGGGCGCGCTGGGCT 96948 | ||| ||||| ||||||||| |||||||| |||||||| |||| Sbjct 812649 GTTTGAGCAGCACGCCCCGCGCGGCATCTACTCTGGCGCGCTCGGCT 812695 >seq3 Length=3222897 Score = 91.5 bits (100), Expect = 2e-12 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 1592223 TTGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGA 1592282 |||| |||||| |||| ||||||||||||||||||||| | |||||||||||||||||| Sbjct 229657 TTGGATGCAAGACTGTCGCCAACATGATCAAGGGCAAGACCCCCGAGGAGATCCGCAAGC 229598 Query 1592283 CCTTTAACAT 1592292 ||| ||||| Sbjct 229597 TCTTCAACAT 229588 Score = 89.7 bits (98), Expect = 6e-12 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 733437 TACTACCAGGCCCTCCGGCACGTGGCCATCGACAAGATCCACGCGCGCCCGCGCGGTCCC 733496 ||||||||| ||| |||| ||| | |||||||||||||||||| ||||||| || Sbjct 633677 TACTACCAGCGTCTCAAGCACATGGTCGACGACAAGATCCACGCGCGTGCGCGCGGCCCG 633618 Query 733497 GTGCAGATGCTCACCAAGCAGCCGGTCGAGGGCCGCTCGCGC 733538 ||||||| ||||| |||||||||||||| || |||||| Sbjct 633617 CTGCAGATCCTCACGCGCCAGCCGGTCGAGGGTCGTTCGCGC 633576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107136327736095