Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03-
01] 35 sequences; 31,617,680 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq6 192 7e-43
seq1 163 3e-34
seq4 138 1e-26
seq2 118 1e-20
seq11 95.1 1e-13
seq3 91.5 2e-12
>seq6
Length=1958011
Score = 192 bits (212), Expect = 7e-43
Identities = 241/327 (74%), Gaps = 3/327 (1%)
Strand=Plus/Plus
Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743
|||| || ||| |||||| | || ||| |||||| ||||||| |||||||| |||
Sbjct 63066 GACGCCCGACTTTGCGTACGCCGAAACACGCGACTCGAAGAAGTTGGCCTTGCCCTGGAG 63125
Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAG 868803
|||||||| |||||| | ||| ||||||| || | ||| ||| ||| |||||
Sbjct 63126 CGAGATCATCTCCATAAAGTCGAAGGGGTTGGTCGAGTAGTACGTCTTCTCGTTGCCGAG 63185
Query 868804 CGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCAT 868863
| ||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 63186 GGCGACGAGCAGACGGTCGGCGACAAACTCAATGTACTGGCACATGAGTCCGGCGTTCAT 63245
Query 868864 GCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923
||| || |||| || || |||| |||| | | ||||| | ||| |||| |||||||||
Sbjct 63246 GCCAATCAGCGAGACGGGGAGCGCCTCGGTGAGGAACTCCTGCTCAATCTTGACGGCCTC 63305
Query 868924 GACGATGATCTGCCTGGGCACGTC-GGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCA 868982
||| |||| | | | ||| || | |||| | | ||| ||| | ||||
Sbjct 63306 CTTGATAATCTTCTCGATGAGGTCGGGGTGCGGGC-GGCGGCGGAGGTGCGTAAACAGCA 63364
Query 868983 GGCAGGCAAAGTCGCAGTGCA-ACCCT 869008
|||||||||||||| ||| | |||||
Sbjct 63365 GGCAGGCAAAGTCGGTGTGGAGACCCT 63391
Score = 158 bits (174), Expect = 1e-32
Identities = 192/262 (73%), Gaps = 0/262 (0%)
Strand=Plus/Minus
Query 18221 CCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCA 18280
|| ||| |||| |||| ||| ||| | ||||||||||||| ||| | ||| | |
Sbjct 1114812 CCTCGCAGCGCTCCGAGTTCGACACTGTCCACCTCCAGTCGGGCACCGAGCATGGCGTGA 1114753
Query 18281 CGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATT 18340
|||||||| |||| ||||||| | ||| ||| |||||||| || ||||||
Sbjct 1114752 CGCTCGGCACGCCGATCGGCCTGCTCGTGCAGAACAAGGACCAGCGTCCGCACGACTACA 1114693
Query 18341 CCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACG 18400
|||| | | | | ||||| || || |||||||||||||| ||| |||| |||||||
Sbjct 1114692 CCGAGACGGACCTGTACCCGCGCCCGTCGCACGCCGACTACACGTACCTGGCAAAGTACG 1114633
Query 18401 GCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCG 18460
|| ||||||||||||| ||||| || || |||| || |||||||| | |||||||
Sbjct 1114632 GCGTCAAGGCGTCGTCTGGCGGCGGACGCGCGTCGGCGCGCGAGACGATTGGCCGCGTCG 1114573
Query 18461 CCGCCGGCGCGGTCGCCGAGAA 18482
| ||||| ||| | || |||||
Sbjct 1114572 CTGCCGGAGCGATTGCGGAGAA 1114551
Score = 136 bits (150), Expect = 5e-26
Identities = 170/232 (73%), Gaps = 7/232 (3%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| |||||||| || | ||||| |||| ||| ||||||||||||||||||||
Sbjct 63387 ACCCTCGTCGCGCGAAATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGGCCGCGCTT 63446
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||||||||| ||||||| | || ||||||||| |||||||||||||||||||||||
Sbjct 63447 CTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCAAA 63506
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCC--CTCCTTGTTGATCCACTTCATCGCC 869356
| || || ||||| ||||| ||| | | ||| | |||||| || ||||
Sbjct 63507 CGCAATCAGACGCTCAGCAAA-----CGAAGACTTCTCGTCCGAGATCCAGCGCAGCGCC 63561
Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT 869408
||||||||||| ||| | | |||| | | || |||||| |||||||
Sbjct 63562 CAGTCGGCCTTCTTCTTGATGCACGGAATGTTCTCAATGGCGTTGAAGAGGT 63613
Score = 120 bits (132), Expect = 4e-21
Identities = 112/140 (80%), Gaps = 2/140 (1%)
Strand=Plus/Minus
Query 19054 TCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCA-GGCCTCGGCGAGCCGTGC 19112
||||||||||||| ||||| ||| |||||| |||| | || |||||||||||
Sbjct 1114317 TCGGCGGCACGGTCACGTGTGTGATCCGCAAC-TGCCCCCTCGGTCTCGGCGAGCCCGCG 1114259
Query 19113 TTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGA 19172
|| |||||| ||||||||| |||||| ||||||||||| ||||||||| | ||||||||
Sbjct 1114258 TTCGACAAGCTCGAGGCCGTGCTCGCGCACGCCATGCTCTCGATCCCGTCGACCAAGGGC 1114199
Query 19173 TTCGAGATTGGCAGCGGGTT 19192
|| ||||| || ||||||
Sbjct 1114198 TTTGAGATCGGGTCCGGGTT 1114179
Score = 109 bits (120), Expect = 7e-18
Identities = 118/154 (77%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 19580 GTGGCCTTTAAGCCGCCGGCCACGATCGGCTCCGCGCAGCAGACGTGCGAA-TACGGCGG 19638
|| || || |||||||| || |||||| |||||||||||| ||| | ||| ||
Sbjct 1114033 GTCGCGTTCAAGCCGCCCGCGACGATCTCGCAGGCGCAGCAGACG-GCGCAGTACTCTGG 1113975
Query 19639 CGAGCAGGCCACGTTGGAGGCGCGCGGGAGGCACGACCCGTGCGTCGTCGCGCGCGCGGT 19698
|||| | | |||| | | |||||||| | ||||||||||||||||| | ||||| ||
Sbjct 1113974 CGAGGACGGCACGCTTGCCGCGCGCGGCCGCCACGACCCGTGCGTCGTGCCCCGCGCCGT 1113915
Query 19699 CCCCATCGTCGAGGCCATGGCGGCCATGGTCCTC 19732
|||||| ||||| ||||||||||||| ||| ||
Sbjct 1113914 GCCCATCATCGAGACCATGGCGGCCATCGTCATC 1113881
Score = 95.1 bits (104), Expect = 1e-13
Identities = 108/142 (76%), Gaps = 5/142 (4%)
Strand=Plus/Plus
Query 869743 GGCGGCGAAAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACA- 869801
||| || || || || |||||||||| |||||||| |||||||| |||| | |||
Sbjct 63918 GGCAGCAAAGAAGGCGAGGACGTGCTCGATAAAGTAGCGCTCGTTGTCGTTCAGCTTGTT 63977
Query 869802 --CCCAGTGGACGGTGTCGG-CGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCT 869858
|||||| | | ||||| ||| ||||| | ||||||||||||||||| ||||||||
Sbjct 63978 GTCCCAGTCGTGGAGGTCGGGCGC-GAGGTTGATCTCCTCGGCGGTCCAGAACGAGGCCT 64036
Query 869859 CGGCCTTTTTGTACATCTCCCA 869880
||||| ||||| | || |||
Sbjct 64037 GCGCCTTCTTGTAGAACTGCCA 64058
>seq1
Length=6947394
Score = 163 bits (180), Expect = 3e-34
Identities = 319/470 (68%), Gaps = 15/470 (3%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||||||||| || || || ||| | | ||||||||||| || | ||||| ||
Sbjct 1522557 CTGGTCGACGTAACGAGCAGTAGCGTCGTATGCACGGAGCATGGGGACAATACCGTTCGA 1522616
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
| |||||||| || || | ||| | || ||| || | ||||| | | ||
Sbjct 1522617 GTAACCGTTGGTACCGGCAATGTACGAACCCTTGGCACGGATGTTGTGGATGTGGAGACC 1522676
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
||| |||||||| | ||||||||| | ||||| ||||| ||||||||||| || ||
Sbjct 1522677 GATACCGCCGGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTC 1522736
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||||||||| |||||||| | || || ||||||||||| | || |||| | || ||
Sbjct 1522737 GATCGAGTCCTCCTTCATGGCGACAAGGAAGCACGACGACATCTGGGGGTTGGGGGTACC 1522796
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
||||||||||| || |||| || |||||| | || ||||||| || ||| ||
Sbjct 1522797 AGCGTTGAAGAGGGTAGGCGAGGCGTGGGTGAAGTAGCGCTCCGACATGAGGTTGTAAGT 1522856
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
| | || | | || | | ||| ||| | ||| ||||| | ||
Sbjct 1522857 CTCAATGAC-CTTGTCAATG--TTGTCGCCGTGG--------ATA----CCGATCGACAC 1522901
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484
|||||||| ||||| |||||| |||||| |||| |||| | | ||||| ||
Sbjct 1522902 GCGCATGATCATGTGCTGGGGACGCTCGGCGACCTTGCCGTCGATGCGGAGGAGGTACGA 1522961
Query 1630485 CCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGT 1630534
|| | |||| ||| |||||||||| | || ||| ||||||||||
Sbjct 1522962 GCGCTCAAGGGTCTTGAAGCCAAAGTAGTTATAGCTAAAGTCGCGGTCGT 1523011
Score = 159 bits (176), Expect = 4e-33
Identities = 320/480 (67%), Gaps = 6/480 (1%)
Strand=Plus/Plus
Query 1628124 GGAAAGGTTGCAAGTCGCCACTTCCGTGGGCGACGAAAACTGGACGATCTCGGTGCACAG 1628183
|| ||||||||| || || || ||| || || ||| | |||||| ||||| ||
Sbjct 1522080 GGCAAGGTTGCAGACGGCAACCTCGTCGGGAGAAGAGTACTCAATGATCTCAGTGCAGAG 1522139
Query 1628184 GTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTCAGGTTGACGGCGTCCTT 1628243
||||| |||| | | |||||||||| ||||||||| | | ||||| ||||||||||
Sbjct 1522140 GTTGGACGACTTGATGGTACCCAGGTGCTGCTGGTTCGACTTGCGGTTGGCGGCGTCCTT 1522199
Query 1628244 GTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGATGGCCGACCAGATCTG 1628303
|| ||||||| |||| | || ||||| |||| ||| | | ||||| |||||| ||
Sbjct 1522200 GTAGAGCATGAAGGGGCCACCAGTCTCTGTCTGGGCCTCAAGGATGGAGAACCAGAGCTT 1522259
Query 1628304 GCGCGCGGGCACGACAGTCC-GCGCGCG--GCCCTNNNNNNNNNNNNNNNNNNNNNNNNN 1628360
| || | || ||| ||| | |||||
Sbjct 1522260 CTGAGC---CTTGATGGTCTTGCGACCCTTGCCCTCGCGCTCGTACTTCTCGTAGAGAGC 1522316
Query 1628361 NTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGA 1628420
||||| || | || | || || ||||| ||||| || || | ||| |
Sbjct 1522317 CTCAAACTCCTCCGAGTGGACGTCCGAGAGACCGGGGCACTCGGCAGGGCACATGAGGGT 1522376
Query 1628421 CCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAA 1628480
|||||||||| ||| | | | || ||| |||||||| |||| || ||||| ||
Sbjct 1522377 CCAGTCGCCATCGGCCTCGACACGCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAA 1522436
Query 1628481 GAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGAC 1628540
|||||| || || || ||||||||||||||||||||| ||||||||| ||||||
Sbjct 1522437 GAGGTCACGAGCACGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAGTCGAA 1522496
Query 1628541 AATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600
| |||||||||||| ||||| |||||| ||||||||| || ||||||| ||| ||
Sbjct 1522497 GACGTCGGCGTGCCAAGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCTCC 1522556
Score = 143 bits (158), Expect = 3e-28
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| ||| |||||| | | ||| || || |||||||||||||||||||||| | ||
Sbjct 962556 GCTTGGACAGCTCGCCGGGGAGGATGAGACGGACGGCGGTCTGGATCTCGCGCGAGGAGA 962497
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||| | ||| | ||| || | ||||| ||| ||||||| |||| |
Sbjct 962496 TGGTCGAGCGGTGGTTGTACGACGCGAGCTTGGACGCCTCAGTGGCGATGCGCTCGAAAA 962437
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||| || || ||||| | | | ||| | ||||||| ||| ||| ||||||||
Sbjct 962436 TGTCGGAAACGAAAGAGTTGAGAATGGCCATGGCCTTGTTGCTGATTCCCGTGTCGGGGT 962377
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACG 1254561
| ||||||||||| |||||||||||| ||||||||||||
Sbjct 962376 GGACCTGCTTGAGGACCTTGTAGATGTACGACGAGTACG 962338
Score = 132 bits (146), Expect = 6e-25
Identities = 172/238 (72%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 1626984 GTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCGGT 1627043
|||||| || ||||| ||||||| ||| | || | ||||| || ||||| ||||||||
Sbjct 1521159 GTCGACAGTGAACTGAATGGCGTTGGCCGAAGGACGCGTGCGGAGGTAGTAGATGCCGGT 1521218
Query 1627044 CTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCGTC 1627103
|||||| ||||| ||| ||||| ||||||||| |||| || | || || ||
Sbjct 1521219 CTTGAGACCGCGCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGCGAGAACGACGGGTT 1521278
Query 1627104 GGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGCCAT 1627163
|||| || | |||||||||||| |||||||| ||| | || ||||| || |
Sbjct 1521279 GGCGAGGTGGATGTTGAGCGACTGCGACTGGTCGATGAAGGCTCCACGGTCGGCAGCAAG 1521338
Query 1627164 GTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGTCG 1627221
||| ||| | || | | | |||||| ||||||||| |||||||||||| ||||
Sbjct 1521339 GTCAATGACGGCCTTCTGCGAAATCTCCCAGACGGTCTTGTAGATGGCCTTGATGTCG 1521396
Score = 105 bits (116), Expect = 8e-17
Identities = 165/236 (70%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 509036 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 509095
|||||| || |||||||| ||||||||| |||||| |||| | | ||| |
Sbjct 1877140 CCCGAGGCGCGTGGCTTTGTCGAAAACTCGTACTTGCGCGGTCTCACGCCCCAAGAGTTC 1877081
Query 509096 TTTCTGCACATGATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCCGAG 509155
|| | ||| || || || || ||||| || ||||||| ||||||||||| ||||||
Sbjct 1877080 TTCTTCCACGCCATGGGAGGTCGTGAGGGTCTTATCGACACTGCCGTCAAGACCGCCGAG 1877021
Query 509156 ACGGGCTACATCCAGCGCCGGTGCATCAAGTCGATGGAGAGCCTGCAGATCAAGCGCGGC 509215
|| || ||||||||||| || ||||| | |||||| ||| || || || |
Sbjct 1877020 ACAGGTTACATCCAGCGTCGACTGGTCAAGGCCATGGAGGACCTCAAGGTCGGCTACGAC 1876961
Query 509216 GGCCTCGTGCGCAACGCCAACGGCGACATCGTCCAGTTTGCCTATGGCGGCGACGG 509271
||| |||||||| | |||||||| ||| || |||| || |||| |||||
Sbjct 1876960 GGCACGGTGCGCAATTCGAACGGCGATATCATCGAGTTCCTGTACGGCGAGGACGG 1876905
Score = 95.1 bits (104), Expect = 1e-13
Identities = 123/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 507714 TCAACCTGGCCGTCACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGC 507773
|||||||| ||||||| | ||||| |||||||| ||||| |||||||||||| |||
Sbjct 1878114 TCAACCTGTCCGTCACCTCGCCGTACAATGCCGACTTCGACGGTGACGAGATGAACTTGC 1878055
Query 507774 ACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGGTGACGCACACCATGAGCGTGTCGCTCA 507833
|||| || ||||| ||| | |||| || ||| || | || | | | || ||
Sbjct 1878054 ACGTTCCGCAGTCGGAGGAGACGCGTGCGGAGCTGTCCCAGATTGCGTGGGTCCCGAGGC 1877995
Query 507834 AGACCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGCCTGGTCATGGAC 507883
||| | ||||| ||||||||||||||| |||| || | ||| ||||
Sbjct 1877994 AGATTATCTCGCCCCAGGCCAACAAGCCCGTCATGGGTATCGTCCAGGAC 1877945
Score = 91.5 bits (100), Expect = 2e-12
Identities = 152/214 (71%), Gaps = 12/214 (6%)
Strand=Plus/Plus
Query 507599 GTCGAGCGCCACCTGCGCGCGGGCGACGCCGTGGTGATGAACCGGCAGCCGTCGCTGCAC 507658
||| | |||||| |||| | |||||| || || | ||||| ||||||||||| |||
Sbjct 3114740 GTCCACCGCCACGTGCGTGATGGCGACATTGTCCTGTTCAACCGTCAGCCGTCGCTCCAC 3114799
Query 507659 ATGGGCTCCATGCTCATGCA-CAAGGTG---GTGCCCATGCCCGGGCGCACCATGCGATT 507714
| | ||| || |||| || ||| ||| || | ||| |||| || | || |
Sbjct 3114800 AAGATCTCGAT---CATGTGTCACCGTGTCCGTGTCCGT-CCCTGGCGTACGCTCCGCCT 3114855
Query 507715 CAACCTGGCCGTCACGGGCACC--TACAACGCCGACTTTGACGGCGACGAGATGAACCTG 507772
||| || || | ||| |||||||||||||| ||||| |||||||||||| ||
Sbjct 3114856 CAA--TGAGTGTGTGTGCAACCCGTACAACGCCGACTTCGACGGAGACGAGATGAACTTG 3114913
Query 507773 CACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGG 507806
||||| |||||| ||||| |||||| ||||||
Sbjct 3114914 CACGTTCCCCAGACCGAGGAGGCGCGTACCGAGG 3114947
>seq4
Length=2551142
Score = 138 bits (152), Expect = 1e-26
Identities = 132/169 (78%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 868681 CGAGACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTC 868740
||| |||| ||| | |||| ||| ||||||| |||||||||||||| ||||||||
Sbjct 1013032 CGATACGTTGGCCATCTGGTACGCGCTCACGCGCGACTCGAAAAAGTTGGCCTTGCCCTG 1013091
Query 868741 GAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC 868800
|||||||| | ||||||||| ||||||||||| | | |||| ||| ||| | ||
Sbjct 1013092 CAGCGAGATGAGCTCCATCCAGTCGAACGGGTTGGCAGAGTAGTAGATCTTGTCGTAGCC 1013151
Query 868801 GAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATG 868849
||||| ||| || ||||| ||||||||||| |||||||||||||||
Sbjct 1013152 GAGCGCGACGACGAGACGGTCCGCGACAAACTCCATGTACTGGCACATG 1013200
Score = 102 bits (112), Expect = 1e-15
Identities = 96/120 (80%), Gaps = 2/120 (2%)
Strand=Plus/Plus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
|| |||||||| ||| | |||||| ||| | |||||| ||||||| |||||||||
Sbjct 1013402 CCCTCGTCGCGCGAGATGAGCTCGTTGGAAAACGTCAGGCCGCGCATGAGCCCGCGCTTC 1013461
Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
|||||||| ||||||| |||| || ||||||||| ||||||||||||||| |||||
Sbjct 1013462 TTGAGCCAGAAGATGGCCGCA-AACGAGCCCGAGAAGAAGATGCCCTCGACGCACGCAAA 1013520
>seq2
Length=4354190
Score = 118 bits (130), Expect = 1e-20
Identities = 178/246 (72%), Gaps = 9/246 (4%)
Strand=Plus/Plus
Query 1572506 TCGGCGTCGGTGTGGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATG 1572565
||||||||| ||||||||||||| ||||| ||||||||||| |||||||| || |
Sbjct 3288407 TCGGCGTCGTTGTGGTTGAAGAGGACGACCTTGACCTCGCCGCGGTAGTCGGCGTCAACT 3288466
Query 1572566 ACGCCTGCGCCGACGTCGATGCC---CCTGACGGCCAGGGACGAGCGCGGCGCCACGCGC 1572622
||||| |||||||| | ||| || | || |||||||| |||||||||||| | |||
Sbjct 3288467 ACGCCCGCGCCGACATTGATACCGTGCTTGGCGGCCAGGCCCGAGCGCGGCGCGATGCGG 3288526
Query 1572623 CCATAGTAGCCCGCGGGTATGGCCACGGCCAGACCGGTG-CG-CACCTGCGCGCGGCCGC 1572680
|| || |||||| || | || ||||| || | | | || ||| | |||| ||||
Sbjct 3288527 CCGTACGTGCCCGCCGGCACCGCGACGGC--GATCTGCGTCGAGACCAGGTCGCGCCCGC 3288584
Query 1572681 GTGCCGGCACGGTCGTCGTCC-CGACAGCCCACAGATCGTATCCGGCGGCGCCTGGCGTG 1572739
|||| |||| | | |||| || | || |||| ||||| || || | |||| |
Sbjct 3288585 GTGCGGGCA-GCACAATGTCCTCGGCGGCGTACAGGTCGTAGCCAGCCGACAGGGGCGAG 3288643
Query 1572740 CCGCGC 1572745
||||||
Sbjct 3288644 CCGCGC 3288649
>seq11
Length=1018449
Score = 95.1 bits (104), Expect = 1e-13
Identities = 105/138 (76%), Gaps = 8/138 (6%)
Strand=Plus/Minus
Query 1573968 GAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATC 1574027
|||| ||||||||| || ||||||||||||||||| || ||||||||||| | || |
Sbjct 63443 GAGGGCGTGCTCGAGCTGAACGCGTCGGACGAGCGTGGTATCGACGTCGTGAGGAACAAG 63384
Query 1574028 ATCAAGCACCACGCCT-CCAAGAGGA---TCGACCTGCCGCCCGGACGCCACAAGGTGAT 1574083
|||||| || | || |||||| || |||||||| ||||| |||||| | ||
Sbjct 63383 ATCAAG----TCGTTTGCCCAGAGGAAGGTCACTCTGCCGCCTGGACGGCACAAGATCAT 63328
Query 1574084 CATCCTCGACGAGGCCGA 1574101
||| ||||| ||||| ||
Sbjct 63327 CATTCTCGATGAGGCGGA 63310
Score = 86.0 bits (94), Expect = 8e-11
Identities = 194/287 (68%), Gaps = 21/287 (7%)
Strand=Plus/Plus
Query 96668 GATCGTCGACCTGGTGCGCAACGACCTGAGCGTGTGCTGCGCGCCCGGCAGCGTCGTCGT 96727
|||||| |||||| | ||| |||||| ||||||| |||| | ||| ||
Sbjct 812424 GATCGTGGACCTGATCCGCTCGGACCTGCTGTCCTGCTGCGTGCCCTCGACGGTCAAGGT 812483
Query 96728 GCCGCCCGGCCGCCTGATGGCGATTGAGACCTACGCCGCCGTGCACCAGATGGTGACCAC 96787
||||| ||||| ||| | |||| ||||| || ||||| | | ||||| ||
Sbjct 812484 GCCGCAG------CTGATCGCGCTCGAGAGCTACGGCG---TGCACAACCTCGTGACGAC 812534
Query 96788 CGTCGACGGCCTGCTCGACCGCGGCCGGAC---GGCGC--TCGACCTCGTGC-GCGCGGC 96841
||| ||| | ||||| |||| || ||||| |||| ||| |||| |
Sbjct 812535 GGTCAGCGGGCAGCTCGC-----GCCGTACATTGGCGCCGTCGAGGCCGTCAAGCGCTGT 812589
Query 96842 CTTTCCGCCGGGCTCGATGACGGGCGCGCCCAAGGCGCGCAGCATGGAGATTCTCGATCG 96901
|| |||||||| || ||||||||||| |||||| |||| | || || | || ||
Sbjct 812590 -TTCCCGCCGGGGTCCATGACGGGCGCACCCAAGCTGCGCTCCGTGCAGCTCCTGGACGA 812648
Query 96902 CCTCGAGAAGCACCGCCCGCGCGGGATCTACTCGGGCGCGCTGGGCT 96948
| ||| ||||| ||||||||| |||||||| |||||||| ||||
Sbjct 812649 GTTTGAGCAGCACGCCCCGCGCGGCATCTACTCTGGCGCGCTCGGCT 812695
>seq3
Length=3222897
Score = 91.5 bits (100), Expect = 2e-12
Identities = 62/70 (89%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 1592223 TTGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGA 1592282
|||| |||||| |||| ||||||||||||||||||||| | ||||||||||||||||||
Sbjct 229657 TTGGATGCAAGACTGTCGCCAACATGATCAAGGGCAAGACCCCCGAGGAGATCCGCAAGC 229598
Query 1592283 CCTTTAACAT 1592292
||| |||||
Sbjct 229597 TCTTCAACAT 229588
Score = 89.7 bits (98), Expect = 6e-12
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 733437 TACTACCAGGCCCTCCGGCACGTGGCCATCGACAAGATCCACGCGCGCCCGCGCGGTCCC 733496
||||||||| ||| |||| ||| | |||||||||||||||||| ||||||| ||
Sbjct 633677 TACTACCAGCGTCTCAAGCACATGGTCGACGACAAGATCCACGCGCGTGCGCGCGGCCCG 633618
Query 733497 GTGCAGATGCTCACCAAGCAGCCGGTCGAGGGCCGCTCGCGC 733538
||||||| ||||| |||||||||||||| || ||||||
Sbjct 633617 CTGCAGATCCTCACGCGCCAGCCGGTCGAGGGTCGTTCGCGC 633576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107136327736095
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |