Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03-
01] 35 sequences; 31,617,680 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq6 201 2e-45
seq1 179 6e-39
seq3 129 9e-24
seq4 122 1e-21
seq2 96.9 5e-14
seq11 86.0 1e-10
>seq6
Length=1958011
Score = 201 bits (222), Expect = 2e-45
Identities = 242/327 (74%), Gaps = 4/327 (1%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
||||||||| ||| || ||| | || ||| |||||| ||||||| |||||||| ||
Sbjct 63065 TGACGCCCGACTTTGCGTACGCCGAAACACGCGACTCGAAGAAGTTGGCCTTGCCCTGGA 63124
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
||||||||| |||||| | ||| ||||||| || ||| ||||||| ||||
Sbjct 63125 GCGAGATCATCTCCATAAAGTCGAAGGGGTTGGTCGAGTAGTACGTCTTCTCGTTGCCGA 63184
Query 794011 --GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068
|||||| ||||| ||||||||||| || |||||||||||||||||||| |||||||
Sbjct 63185 GGGCGACG--AGCAGACGGTCGGCGACAAACTCAATGTACTGGCACATGAGTCCGGCGTT 63242
Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128
|||||| || |||| ||||| |||| |||| ||| ||||| | ||| |||| ||||||
Sbjct 63243 CATGCCAATCAGCGAGACGGGGAGCGCCTCGGTGAGGAACTCCTGCTCAATCTTGACGGC 63302
Query 794129 CTCGATGATGATCTGCCTGGGCACGTCGGACGACGGCTTGTCGACGAGCATCGTGTAGAG 794188
||| |||| |||| | | | ||||| ||| | | ||| ||| | ||
Sbjct 63303 CTCCTTGATAATCTTCTCGATGAGGTCGGGGTGCGGGCGGCGGCGGAGGTGCGTAAACAG 63362
Query 794189 CAGGCAGGCAAAGTCGCAATGCAGACC 794215
|||||||||||||||| || |||||
Sbjct 63363 CAGGCAGGCAAAGTCGGTGTGGAGACC 63389
Score = 136 bits (150), Expect = 6e-26
Identities = 216/303 (71%), Gaps = 9/303 (3%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| |||||||| || | ||||| ||| ||| ||||||||||||||||||||
Sbjct 63387 ACCCTCGTCGCGCGAAATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGGCCGCGCTT 63446
Query 794400 CTTGAGCCAAAAGATGGCACAGAAAC-TGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458
||||||||| ||||||| | |||| ||||||||| ||||||||||||||||||||||
Sbjct 63447 CTTGAGCCAGAAGATGG-AGGCAAACGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCAA 63505
Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGC-CCTCTTTGTTGATCCACTTCATCGCC 794517
| | | || ||||| ||||| | || | ||| | |||||| || ||||
Sbjct 63506 ACGCAATCAGACGCTCAGCAAACG----AAGACTTCTCGTCCGAGATCCAGCGCAGCGCC 63561
Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTT 794576
|| || ||||| ||| | | | || | | || |||||| ||||||| || |
Sbjct 63562 CAGTCGGCCTTCTTCTTGATGCACGGAATGTTCTCAATGGCGTTGAAGAGGTACGTGCGG 63621
Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636
| | | ||| | ||| |||||||||||||| ||||| ||||| |||||||||||
Sbjct 63622 C-GGGCATTGTCGCGAATGTACGTGTCGATGAGGAGTGAGTACGTCTCCGAGTGGATGTT 63680
Query 794637 TTC 794639
||
Sbjct 63681 CTC 63683
Score = 102 bits (112), Expect = 1e-15
Identities = 110/145 (76%), Gaps = 3/145 (2%)
Strand=Plus/Plus
Query 796215 GGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGCGAGA- 796273
||| || || |||||||||||||||| |||||||| ||||||| |||| | ||| |
Sbjct 63918 GGCAGCAAAGAAGGCGAGGACGTGCTCGATAAAGTAGCGCTCGTTGTCGTTCAGCTTGTT 63977
Query 796274 --CCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTC 796331
|||||| | ||||| |||||| || ||||||||||||||| || |||||||
Sbjct 63978 GTCCCAGTCGTGGAGGTCGGGCGCGAGGTTGATCTCCTCGGCGGTCCAGAACGAGGCCTG 64037
Query 796332 GGCCTTTTTGTACATCTCCCATATC 796356
||||| ||||| | || ||| |||
Sbjct 64038 CGCCTTCTTGTAGAACTGCCAGATC 64062
>seq1
Length=6947394
Score = 179 bits (198), Expect = 6e-39
Identities = 196/258 (76%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| ||||| |||| ||||||| ||| ||| |||||| | |
Sbjct 962594 GTACTTGGTGACGGCCTTGGTGCCCTCGGAGATGGCGTGCTTGGACAGCTCGCCGGGGAG 962535
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| || || |||||||||||||||||||| | | ||| || ||| | ||| || ||
Sbjct 962534 GATGAGACGGACGGCGGTCTGGATCTCGCGCGAGGAGATGGTCGAGCGGTGGTT-GTACG 962476
Query 1485591 -CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||| || | ||||| ||| ||||||| |||| |||||| || || ||||| |
Sbjct 962475 ACGCGAGCTTGGACGCCTCAGTGGCGATGCGCTCGAAAATGTCGGAAACGAAAGAGTTGA 962416
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|| | ||| | |||||| ||| ||| ||||||||| ||||||||||| |||||||
Sbjct 962415 GAATGGCCATGGCCTTGTTGCTGATTCCCGTGTCGGGGTGGACCTGCTTGAGGACCTTGT 962356
Query 1485710 AAACAAAGGACGAGTACG 1485727
| | | ||||||||||
Sbjct 962355 AGATGTACGACGAGTACG 962338
Score = 147 bits (162), Expect = 3e-29
Identities = 291/436 (67%), Gaps = 8/436 (2%)
Strand=Plus/Plus
Query 2071581 GACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTCAG 2071640
|| ||| ||||| ||||||| |||| | |||| ||||||| ||||||||| | |
Sbjct 1522125 GATCTCAGTGCAGAGGTTGGACGACTTGATGGTACCCAGGTGCTGCTGGTTCGACTTGCG 1522184
Query 2071641 GTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGAT 2071700
|||| |||||||||||| |||||| |||| |||| ||||| |||| ||| | |||
Sbjct 1522185 GTTGGCGGCGTCCTTGTAGAGCATGAAGGGGCCACCAGTCTCTGTCTGGGCCTCAAGGAT 1522244
Query 2071701 GGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCG----GCCCTNNNNNNNNN 2071756
|| |||| | || | || || | || ||| |||||
Sbjct 1522245 GGAGAACCAGA----GCTTCTGAGCCTTGATGGTCTTGCGACCCTTGCCCTCGCGCTCGT 1522300
Query 2071757 NNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGG 2071816
|||| || ||||| | | |||| || || ||||| |||||
Sbjct 1522301 ACTTCTCGTAGAGAGCCTCAAACTCCTCCGAGTGGACGTCCGAGAGACCGGGGCACTCGG 1522360
Query 2071817 ACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACG 2071876
||||| | ||| | ||||||||| | | | | || || ||| || ||||||
Sbjct 1522361 CAGGGCACATGAGGGTCCAGTCGCCATCGGCCTCGACACGCTTCATGAAGAGGTCGGGGA 1522420
Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936
|||| ||| |||| ||||| || || || || ||||||||||||||||||||| |
Sbjct 1522421 TCCAGAGGGCGTAGAAGAGGTCACGAGCACGAACCTCCTCCTTGCCGTGGTTCTTGCGGA 1522480
Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996
||||||| |||||| || |||||||||||| ||||| |||||| ||||||||| ||
Sbjct 1522481 GGTCGAGGAAGTCGAAGACGTCGGCGTGCCAAGGCTCAAGGTAGATGGCAAAGGCACCGG 1522540
Query 2071997 TGCGCTTGCCGCCGCC 2072012
||||||| ||| ||
Sbjct 1522541 GGCGCTTGTTGCCTCC 1522556
Score = 131 bits (144), Expect = 3e-24
Identities = 185/260 (71%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| || || || || ||| | | ||||||||||| |||| ||||| ||
Sbjct 1522557 CTGGTCGACGTAACGAGCAGTAGCGTCGTATGCACGGAGCATGGGGACAATACCGTTCGA 1522616
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
| |||||||| || || | ||| | ||| ||| || | ||||| | | ||
Sbjct 1522617 GTAACCGTTGGTACCGGCAATGTACGAACCCTTGGCACGGATGTTGTGGATGTGGAGACC 1522676
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| |||||||| | ||||||||| | ||||| | || || || |||||||| || ||
Sbjct 1522677 GATACCGCCGGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTC 1522736
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||||||||| |||||||| | | || ||||||||||| | || ||| | || ||
Sbjct 1522737 GATCGAGTCCTCCTTCATGGCGACAAGGAAGCACGACGACATCTGGGGGTTGGGGGTACC 1522796
Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799
|| |||||||| || ||||
Sbjct 1522797 AGCGTTGAAGAGGGTAGGCG 1522816
Score = 120 bits (132), Expect = 5e-21
Identities = 169/236 (72%), Gaps = 6/236 (3%)
Strand=Plus/Plus
Query 2069253 GTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGT 2069312
|||||| || ||||| ||||||||||| | ||| || ||||| || ||||| ||||||||
Sbjct 1521159 GTCGACAGTGAACTGAATGGCGTTGGCCGAAGGACGCGTGCGGAGGTAGTAGATGCCGGT 1521218
Query 2069313 CTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCATTCGGGAC 2069372
|||||| ||||| ||| ||||| ||||||||| |||| | | ||||
Sbjct 1521219 CTTGAGACCGCGCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGCGAGAACGACGGGTT 1521278
Query 2069373 GGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGCCAT 2069432
||| || || |||||||||||| |||||||| ||| | |||||||| || |
Sbjct 1521279 GGCGAGGTGGATGTTGAGCGACTGCGACTGGTCGATGAAGGCTCCACGGTCGGCAGCAAG 1521338
Query 2069433 GTCGATGGTCACGCGGTT---GGACACCTCCCACACGGTCTTGAACAGGGCCTTGA 2069485
||| ||| ||| || || | |||||| ||||||||| | | ||||||||
Sbjct 1521339 GTCAATG---ACGGCCTTCTGCGAAATCTCCCAGACGGTCTTGTAGATGGCCTTGA 1521391
Score = 105 bits (116), Expect = 1e-16
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081
|||||| || |||||||| ||||||||| |||||| |||| | | ||| |
Sbjct 1877140 CCCGAGGCGCGTGGCTTTGTCGAAAACTCGTACTTGCGCGGTCTCACGCCCCAAGAGTTC 1877081
Query 431082 TTTCTGCACATGATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAG 431141
|| | ||| || || || || |||||||| ||||||| ||||||||||| ||||||
Sbjct 1877080 TTCTTCCACGCCATGGGAGGTCGTGAGGGTCTTATCGACACTGCCGTCAAGACCGCCGAG 1877021
Query 431142 ACGGGCTACATCCAGCGTCGGTGCATCAAATCGATGGAGAGCCTGCAGATCAAGCGCGGC 431201
|| || |||||||||||||| |||| | |||||| ||| || || || |
Sbjct 1877020 ACAGGTTACATCCAGCGTCGACTGGTCAAGGCCATGGAGGACCTCAAGGTCGGCTACGAC 1876961
Query 431202 GGCCTCGTGCGCAACGCCAACGGCGACATTGTCCAGTT 431239
||| |||||||| | |||||||| || || ||||
Sbjct 1876960 GGCACGGTGCGCAATTCGAACGGCGATATCATCGAGTT 1876923
Score = 105 bits (116), Expect = 1e-16
Identities = 130/177 (73%), Gaps = 8/177 (5%)
Strand=Plus/Minus
Query 429633 ACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAG 429692
|||||||| ||||||||| |||| || | ||||| |||||||| ||||| ||||||
Sbjct 1878124 ACCTTCCGTCTCAACCTGTCCGTCACCTCGCCGTACAATGCCGACTTCGACGGTGACGAG 1878065
Query 429693 ATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTCGCCCACACCATGGGC 429752
|||||| ||||||| || ||||||||| | | || || || | |||| | ||
Sbjct 1878064 ATGAACTTGCACGTTCCGCAGTCGGAGGAGACGCGTGCGGAGCTGTCCCAGA----TTGC 1878009
Query 429753 GTGGCCCTCAAGGCCG----TGTCGCCGCAGGCCAACAAGCCCATCATCGGGCTCGT 429805
|||| | | |||| | | ||||| ||||||||||||||| |||| || ||||
Sbjct 1878008 GTGGGTCCCGAGGCAGATTATCTCGCCCCAGGCCAACAAGCCCGTCATGGGTATCGT 1877952
>seq3
Length=3222897
Score = 129 bits (142), Expect = 9e-24
Identities = 368/560 (66%), Gaps = 15/560 (3%)
Strand=Plus/Minus
Query 653582 GTCGTGGTGACGCGCAACGGCGACGGCGCCAACGCGGTCAAGATCGTCACCCGCGCCATG 653641
||| || | ||| ||||| ||||| ||| ||||||||| | |||| | | |
Sbjct 634094 GTCATGATCACGACCAACGCGGACGGACTCAAGTTTGTCAAGATCCGTATCCGCTCGACG 634035
Query 653642 CGCCAGCCCG-AGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTGGG 653700
|| | |||| || | || ||||| | ||||||| ||||| || ||||| ||| | ||
Sbjct 634034 CGT-ATCCCGCAGATTGGTGACAAGTTTGCGTCGCGTCACGGTCAGAAGGGTACCATTGG 633976
Query 653701 CAGCGTGCGCTCGACCG-AGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACA 653759
| | | | || | | |||| ||||||| || | | ||| |||| ||| |||||||
Sbjct 633975 TATCACGTAC-CGCCAGGAGGACATGCCGT--TCACGG-GCGAGGGCATCACACCCGACA 633920
Query 653760 TCGTCATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCC 653819
| ||||||||||||||||||| || ||||| |||||||| || | || | ||| |
Sbjct 633919 TTATCATCAACCCGCACGCCATTCCCTCGCGTATGACCATCGGGCACTTGGTCGAGTGTC 633860
Query 653820 TCCTGGGCAAGGTGGCCTGCCGCGAGGGCTACGTGGGCGACGGCACCCCGTTTGGCGGCG 653879
| ||| |||| | ||| || || || |||||||| || ||||| ||
Sbjct 633859 TTCTGTCCAAGCTCGCCACCCTGACCGGTCGCGAGGGCGACGCGACGCCGTTCACCGAGC 633800
Query 653880 TCACCGTNNNNNNNNNNNNNNNNNAGTTGGCCCGCCACGGGTGCGAGCGCTACGGCAAGG 653939
| || || | || | ||| | | ||| ||| |
Sbjct 633799 TGACGGTCGAGTCGGTGTCCAAGCTGCTGCGTGAGCGCGGATACCAGCAGCGTGGCTTTG 633740
Query 653940 AGGTGCTCTACCACCCGCACACGGGCG---AGCCCATGGAGGCGTTGATCTT-TTCGGCG 653995
|||| ||||||||| ||||||||| ||| || ||||| | || || |||
Sbjct 633739 AGGTCCTCTACCACGGCCACACGGGCCGCAAGC---TGCAGGCGCAGTGCTACTTTGGC- 633684
Query 653996 CCGGTCTACTACCAGGCCCTGCGCCACGTGGCCATCGACAAGATCCACGCCCGGCCGCGC 654055
||| ||||||||| || ||| ||| | ||||||||||||||| || |||||
Sbjct 633683 CCGACGTACTACCAGCGTCTCAAGCACATGGTCGACGACAAGATCCACGCGCGTGCGCGC 633624
Query 654056 GGCCCCGTGCAGATGCTCACCAAGCAGCCGGTCGAGGGCCGGTCGCGCTCGGGCGGCTTT 654115
||||| ||||||| ||||| |||||||||||||| || |||||| || || |
Sbjct 633623 GGCCCGCTGCAGATCCTCACGCGCCAGCCGGTCGAGGGTCGTTCGCGCGACGGTGGTCTG 633564
Query 654116 CGCCTCGGAGAGATGGAGAG 654135
|| ||||||||||||||||
Sbjct 633563 CGATTCGGAGAGATGGAGAG 633544
Score = 111 bits (122), Expect = 2e-18
Identities = 144/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| ||||| |||| ||||||| | | || || ||| | |
Sbjct 1982464 GTACTTGGTGACGGCCTTGGTGCCCTCCGAGATGGCGTGCTTCGAGAGCTCACCGGGGAG 1982523
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| ||||| |||||||||||||||||||| | || || ||| | ||| |
Sbjct 1982524 GATGAGGCGGACGGCGGTCTGGATCTCGCGCGACGAAATGGTCGAGCGGTGGTTGTAGGA 1982583
Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650
||| || |||||||||| | ||||| |||| ||||| ||| |||||||| |
Sbjct 1982584 CGCGAGCTTCGAGGCCTCGGTGGCAATGCGCTCGAAAATGTCCGAGACGAACGAGTTGAG 1982643
Query 1485651 GATCGACATCGATTTGTTG 1485669
|| | ||| | ||||||
Sbjct 1982644 AATGGCCATGGCCTTGTTG 1982662
>seq4
Length=2551142
Score = 122 bits (134), Expect = 1e-21
Identities = 117/150 (78%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
||| ||| ||||||| |||||||||||||| |||||||| |||||||| | |||||||
Sbjct 1013051 TACGCGCTCACGCGCGACTCGAAAAAGTTGGCCTTGCCCTGCAGCGAGATGAGCTCCATC 1013110
Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027
|| |||||||||||| | |||| ||| ||| | ||||||| | | || |||
Sbjct 1013111 CAGTCGAACGGGTTGGCAGAGTAGTAGATCTTGTCGTAGCCGAGCGCGACGACGAGACGG 1013170
Query 794028 TCGGCGACGAATTCAATGTACTGGCACATG 794057
|| ||||| || || |||||||||||||||
Sbjct 1013171 TCCGCGACAAACTCCATGTACTGGCACATG 1013200
Score = 96.9 bits (106), Expect = 5e-14
Identities = 95/120 (79%), Gaps = 2/120 (2%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| |||||||| ||| | |||||| ||| |||||| ||||||| |||||||||
Sbjct 1013402 CCCTCGTCGCGCGAGATGAGCTCGTTGGAAAACGTCAGGCCGCGCATGAGCCCGCGCTTC 1013461
Query 794401 TTGAGCCAAAAGATGGCACAGAAAC-TGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
|||||||| |||||||| | |||| ||||||||| ||||||||||||||| |||||
Sbjct 1013462 TTGAGCCAGAAGATGGC-CGCAAACGAGCCCGAGAAGAAGATGCCCTCGACGCACGCAAA 1013520
>seq2
Length=4354190
Score = 96.9 bits (106), Expect = 5e-14
Identities = 176/250 (70%), Gaps = 7/250 (3%)
Strand=Plus/Plus
Query 2017590 TCGGCGTCGGTATGGTTAAAGAGCATGACGCCAACCTCGCCTCGATAGTCGGCATCGATG 2017649
||||||||| | ||||| ||||| | ||| |||||||| || |||||||| || |
Sbjct 3288407 TCGGCGTCGTTGTGGTTGAAGAGGACGACCTTGACCTCGCCGCGGTAGTCGGCGTCAACT 3288466
Query 2017650 ACGCCGGCGCCGACGTCGATGCCG-GCACGG--GCCATCGACGAGCGCGGCGCCACACGC 2017706
||||| |||||||| | ||| ||| || || |||| |||||||||||| | ||
Sbjct 3288467 ACGCCCGCGCCGACATTGATACCGTGCTTGGCGGCCAGGCCCGAGCGCGGCGCGATGCGG 3288526
Query 2017707 CCGTAATAGCCCGCCGGTATGGCCACGGCCAGTCTGATTTG-CACCTGTGCGCGACCGCG 2017765
||||| ||||||||| | || ||||| | |||| | | ||| | |||| |||||
Sbjct 3288527 CCGTACGTGCCCGCCGGCACCGCGACGGCGA-TCTGCGTCGAGACCAGGTCGCGCCCGCG 3288585
Query 2017766 TGCCGGTACGGTGGTTGT-CTCGACAGCCCACAGGTCGTATCCGGCGGCGCCCGGTGTGC 2017824
||| || | | ||| |||| | || |||||||||| || || | || | ||
Sbjct 3288586 TGCGGGCA-GCACAATGTCCTCGGCGGCGTACAGGTCGTAGCCAGCCGACAGGGGCGAGC 3288644
Query 2017825 CGCGCGACGG 2017834
|||||| |||
Sbjct 3288645 CGCGCGTCGG 3288654
>seq11
Length=1018449
Score = 86.0 bits (94), Expect = 1e-10
Identities = 147/211 (70%), Gaps = 8/211 (4%)
Strand=Plus/Minus
Query 2019032 GGGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGG 2019091
|||| |||||| | || || || ||| ||| ||||| |||| || |||| | ||
Sbjct 63516 GGGCTTGCCCGGTATTGGTAAAACGACGTCGATCCACTGCCTCGCGCACGCGCTCCTCGG 63457
Query 2019092 CGCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGT 2019151
|| || | | |||| ||||||||| || || ||||| |||||||| || | |||||
Sbjct 63456 CGACGCGTACAAGGAGGGCGTGCTCGAGCTGAACGCGTCGGACGAGCGTGGTATCGACGT 63397
Query 2019152 CGTGCGTAGAATCATCAAGCATCACGCTT--CGAAAAGAA--TCGACCTGCCGCCCGGCC 2019207
|||| | | | |||||| || || | | | ||| || |||||||| || |
Sbjct 63396 CGTGAGGAACAAGATCAAGT----CGTTTGCCCAGAGGAAGGTCACTCTGCCGCCTGGAC 63341
Query 2019208 GCCACAAGGTGATCATCCTCGATGAGGCCGA 2019238
| |||||| | ||||| ||||||||||| ||
Sbjct 63340 GGCACAAGATCATCATTCTCGATGAGGCGGA 63310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916242676890365
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