Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03-
01] 35 sequences; 31,617,680 total letters
Query= NC_023423.1
Length=610033
Score E
Sequences producing significant alignments: (Bits) Value
seq3 84.2 9e-11
>seq3
Length=3222897
Score = 84.2 bits (92), Expect = 9e-11
Identities = 110/149 (74%), Gaps = 5/149 (3%)
Strand=Plus/Plus
Query 309698 CGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGG 309757
|||| |||||||| || |||||||| | |||||||||| |||||| ||| | || ||
Sbjct 633878 CGATGGTCATACGCGAGGGAATGGCGTGCGGGTTGATGATAATGTCGGGTGTGATGCCCT 633937
Query 309758 TGATTGGGTTGAAAGGCATATCTTCTTCA-GGTACAATCAAACCAATAGTTCCCTTTTGA 309816
| | |||| ||||| || || | ||||| | | |||||| || ||||| |||
Sbjct 633938 CGCCCG---TGAACGGCATGTCCTCCTGGCGGTACG-TGATACCAATGGTACCCTTCTGA 633993
Query 309817 GCGTGCCTGGAAGCAAACTTGTCACCAAT 309845
|||| | || |||||||||||||||||
Sbjct 633994 CCGTGACGCGACGCAAACTTGTCACCAAT 634022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1951973524661480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |