Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03- 01] 35 sequences; 31,617,680 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 9e-11 >seq3 Length=3222897 Score = 84.2 bits (92), Expect = 9e-11 Identities = 110/149 (74%), Gaps = 5/149 (3%) Strand=Plus/Plus Query 309698 CGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGG 309757 |||| |||||||| || |||||||| | |||||||||| |||||| ||| | || || Sbjct 633878 CGATGGTCATACGCGAGGGAATGGCGTGCGGGTTGATGATAATGTCGGGTGTGATGCCCT 633937 Query 309758 TGATTGGGTTGAAAGGCATATCTTCTTCA-GGTACAATCAAACCAATAGTTCCCTTTTGA 309816 | | |||| ||||| || || | ||||| | | |||||| || ||||| ||| Sbjct 633938 CGCCCG---TGAACGGCATGTCCTCCTGGCGGTACG-TGATACCAATGGTACCCTTCTGA 633993 Query 309817 GCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 |||| | || ||||||||||||||||| Sbjct 633994 CCGTGACGCGACGCAAACTTGTCACCAAT 634022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951973524661480