Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03- 01] 35 sequences; 31,617,680 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 5e-11 >seq6 Length=1958011 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | || || || || ||| Sbjct 42120 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGAC 42061 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || ||| || ||| || Sbjct 42060 ACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 42001 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| |||||| | || || || | || | |||| |||||| || Sbjct 42000 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTTTCCGACTACAACATC 41941 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || |||||||| || Sbjct 41940 CAGAAGGAGTCCACCCTTCACCTCGT 41915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820270027235