Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03- 01] 35 sequences; 31,617,680 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 5e-15 >seq6 Length=1958011 Score = 96.9 bits (106), Expect = 5e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 39606 TAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAG 39665 |||||| | |||||| ||||| || || ||||| || | ||| | ||||| | Sbjct 63356 TAAACAGCAGGCAGGCAAAGTCGGTGTGGAGACCCTCGTCGCGCGAAATGAGCTCGTTCG 63415 Query 39666 AAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATC 39725 | || ||||| || ||||| || || ||||| |||||||| || |||| ||||| || | Sbjct 63416 AGAAGGTGAGACCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGC 63475 Query 39726 CAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAA 39761 | || ||||||||||| || || || ||||| |||| Sbjct 63476 CCGAGAAGAAGATGCCCTCGACGGCGGCAAACGCAA 63511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908499477400