Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03-
01] 35 sequences; 31,617,680 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq2 100 2e-16
>seq2
Length=4354190
Score = 100 bits (110), Expect = 2e-16
Identities = 160/227 (70%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 30231 TGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTT 30290
||||||| || |||||||| | ||||||||| |||||||| || |||||||| |||||
Sbjct 191142 TGTACTCGGCCCCGAAATGGCGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCCTCGC 191201
Query 30291 CCCTGTGCTCGAAGCCCCTCTTG-TCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 30349
|| |||| ||| ||||| | | || | | || | | |||||| ||||||||||
Sbjct 191202 GCCGGTGCCCGA-GCCCCACGCGGTCGAGGTACTCGCGGCTCCCGTTGCCGTCCCAGATG 191260
Query 30350 TTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGC 30409
| || ||||| | | ||| | | || ||| || ||| ||||||||||||
Sbjct 191261 TGCACGCCCTTGGCGGCCAGCGCCGCGCCGTCCGTGTTGCCCGAGACAAACCACAGCAGC 191320
Query 30410 TCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456
||||| | |||| | | ||||| | |||||| || ||||| ||
Sbjct 191321 TCCTCAATGACGCCGCGCGTGAAGACGCGCTTGGTGGTCAGGAGCGG 191367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310226683220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |