Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03-
01] 35 sequences; 31,617,680 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq6 93.3 3e-14
>seq6
Length=1958011
Score = 93.3 bits (102), Expect = 3e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|||||||| |||||| || ||||| || || || || || || |||| || || ||
Sbjct 41465 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCGAGCTGC 41524
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| ||||| || || | ||||| ||||| || || | ||||||||||| |||| ||
Sbjct 41525 TTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATC-TT 41583
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| |||||| | || ||||| ||| || || | || ||||| || |||||
Sbjct 41584 GCTCTTAACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGCGTAATCGTCTTGCCGGT 41643
Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707
| ||| |||||||| |||||||||
Sbjct 41644 AAGCGTCTTCACAAAGATCTGCATG 41668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729465748155
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |