Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03- 01] 35 sequences; 31,617,680 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq6 93.3 3e-14 >seq6 Length=1958011 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 |||||||| |||||| || ||||| || || || || || || |||| || || || Sbjct 41465 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCGAGCTGC 41524 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | ||||| ||||| || || | ||||||||||| |||| || Sbjct 41525 TTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATC-TT 41583 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | |||||| | || ||||| ||| || || | || ||||| || ||||| Sbjct 41584 GCTCTTAACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGCGTAATCGTCTTGCCGGT 41643 Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707 | ||| |||||||| ||||||||| Sbjct 41644 AAGCGTCTTCACAAAGATCTGCATG 41668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729465748155