Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03- 01] 35 sequences; 31,617,680 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 3e-14 >seq2 Length=4354190 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 ||||||| | ||||||||| |||||||| || |||||||| ||||| || |||| ||| Sbjct 191154 CGAAATGGCGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCCTCGCGCCGGTGCCCGA 191213 Query 30075 AGCCCCTCTTG-TCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTC 30133 ||||| | | || | | || | | |||||| |||||||||| | || ||||| Sbjct 191214 -GCCCCACGCGGTCGAGGTACTCGCGGCTCCCGTTGCCGTCCCAGATGTGCACGCCCTTG 191272 Query 30134 TCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACG 30193 ||| ||| | | || ||| || ||| ||||||||||||||||| | |||| Sbjct 191273 GCGGCCAGCGCCGCGCCGTCCGTGTTGCCCGAGACAAACCACAGCAGCTCCTCAATGACG 191332 Query 30194 GCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 | | ||||| | |||||| || ||||| || Sbjct 191333 CCGCGCGTGAAGACGCGCTTGGTGGTCAGGAGCGG 191367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163026746010