Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03-
01] 35 sequences; 31,617,680 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 3e-14
>seq2
Length=4354190
Score = 93.3 bits (102), Expect = 3e-14
Identities = 151/215 (70%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074
||||||| | ||||||||| |||||||| || |||||||| ||||| || |||| |||
Sbjct 191154 CGAAATGGCGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCCTCGCGCCGGTGCCCGA 191213
Query 30075 AGCCCCTCTTG-TCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTC 30133
||||| | | || | | || | | |||||| |||||||||| | || |||||
Sbjct 191214 -GCCCCACGCGGTCGAGGTACTCGCGGCTCCCGTTGCCGTCCCAGATGTGCACGCCCTTG 191272
Query 30134 TCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACG 30193
||| ||| | | || ||| || ||| ||||||||||||||||| | ||||
Sbjct 191273 GCGGCCAGCGCCGCGCCGTCCGTGTTGCCCGAGACAAACCACAGCAGCTCCTCAATGACG 191332
Query 30194 GCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228
| | ||||| | |||||| || ||||| ||
Sbjct 191333 CCGCGCGTGAAGACGCGCTTGGTGGTCAGGAGCGG 191367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406163026746010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |