Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq6955 125 2e-23 seq6019 118 2e-21 seq4583 118 2e-21 seq4584 109 1e-18 >seq6955 Length=16480 Score = 125 bits (138), Expect = 2e-23 Identities = 139/183 (76%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 230428 GACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGA 230486 |||||| | || ||||| || || |||||||| || |||| ||| | ||||||||||| Sbjct 7664 GACGCTCTCCC-TGTCGGTCTCATAGGCATGAATGCAAAACTCATGTGTCAGTACATCGA 7606 Query 230487 ATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAA 230546 || || |||||||| || |||| || ||||| |||| || ||||||||||| | || Sbjct 7605 GTTTGTTGCCGACCGTCTTCTTGTCGCCCTTGGAAACGAAAAGGTGTACAACTCAACCAA 7546 Query 230547 CCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCG 230606 ||| || | || ||||| | ||||| | || || |||||||| ||||| |||||||| Sbjct 7545 CCCGTTCGACTTCATGGATATGATTTCCTTGCAGGGCAAGACCAATTTCTTTGAAAAGCG 7486 Query 230607 TGT 230609 || Sbjct 7485 GGT 7483 >seq6019 Length=9942 Score = 118 bits (130), Expect = 2e-21 Identities = 128/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || |||||||||||| | | || ||| | || ||||| || || || ||||| || | Sbjct 2376 CTCATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTTGCCGATCGTCTG 2435 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 |||| || ||||| |||| || ||||||||||| | ||||||||| | || ||||| Sbjct 2436 CTTGTCGCCCTTGGCAACGACAAGGTGTACAACTCAACGAACCCCTTCGACTTCATGGAC 2495 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAA--GCGTGTCAG 230612 | || ||||| || || ||||| ||||||||||| || ||||||||| Sbjct 2496 ATGATCTCGCTCCAGGGCAAGACTAACTTCTTCGAGAAGCGCGTGTCAG 2544 >seq4583 Length=9780 Score = 118 bits (130), Expect = 2e-21 Identities = 128/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || |||||||||||| | | || ||| | || ||||| || || || ||||| || | Sbjct 7346 CTCATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTCGCCGATCGTCTG 7405 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 |||| || ||||| |||| || ||||||||||| | ||||||||| | || ||||| Sbjct 7406 CTTGTAGCCCTTGGCAACGACAAGGTGTACAACTCAACGAACCCCTTCGACTTCATGGAC 7465 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAA--GCGTGTCAG 230612 | || ||||| || || ||||| ||||||||||| || ||||||||| Sbjct 7466 ATGATCTCGCTCCAGGGCAAGACTAACTTCTTCGAGAAGCGCGTGTCAG 7514 >seq4584 Length=6343 Score = 109 bits (120), Expect = 1e-18 Identities = 130/175 (74%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 230436 TCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAG 230494 ||| |||| | || |||||||||||| | | || ||| | || ||||| || || || | Sbjct 3897 TCCCTGTCTCTCTCATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTTG 3956 Query 230495 CCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTG 230554 | || ||| | | || || ||||| | || || ||||||||||| | || ||||| | Sbjct 3957 CTGATCGCCTGCTCGTGGCCCTTGGCAATGACAAGGTGTACAACTCCACAAATCCCTTCG 4016 Query 230555 CATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGT 230609 || ||||| | || |||||||| || ||||| ||||||||||| |||||||| Sbjct 4017 ACTTCATGGACATGATCTCGCTTCAGGGCAAGACTAACTTCTTCGAGAAGCGTGT 4071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057493257111890