Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq6955 127 2e-24 seq6019 122 9e-23 seq4584 122 9e-23 seq4583 122 9e-23 >seq6955 Length=16480 Score = 127 bits (140), Expect = 2e-24 Identities = 303/453 (67%), Gaps = 4/453 (1%) Strand=Plus/Plus Query 16941 GTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGA 17000 |||| || || | |||| |||||| || || || || | ||||| || | || | Sbjct 7790 GTTTCAGGTGACTGAACAGCAGACACGCAAAGTCAGTGTGCATACCCTCATCACGACTAA 7849 Query 17001 TAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCG 17060 | || || || || || |||| || |||||| ||| || |||||||||||||| || | Sbjct 7850 TGAGCTCATTGGAGAAAGTCAGACCAGGCATCAGTCCCCGCTTCTTTAACCAAAAGATGG 7909 Query 17061 CGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGG 17120 || ||||| ||||||||||| || ||||| || || ||||| || | || || || | Sbjct 7910 ACGCAAACGATCCAGAAAAGAAGATGCCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCG 7969 Query 17121 CGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATG 17179 || | || | | | || | || ||||| |||| || || || | |||||| Sbjct 7970 CGAAGGTGGAG-CGATGGTCGGATATCCAACGTAAAGCCCAGTCAGCCTTGAGTTTTATG 8028 Query 17180 CAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGG-TCGATTATATA 17238 || || ||||| || || | || | | || | | | | ||| || | || || Sbjct 8029 CATGGTATTGTTTCGATTGCATCGAAAAGGTAGTC-TCTCCGGGAAGGTTCCTTGATGTA 8087 Query 17239 CGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCC 17298 ||||| ||||| ||| || | || ||||| ||||||||||| || ||||| || Sbjct 8088 GGTATCAATGAGGAGGGAATATGTCTCAGAGTGGATGTTCTCCATCATGATTTGAAAGCC 8147 Query 17299 GTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTC 17358 ||||||||| || || || || ||| || || | ||||| || | || || || Sbjct 8148 GTAAAAGCAACGTGCCTCTGCGGCTTGCACCTCTTTCGAAAATCGCTCGACCAGGTTCTC 8207 Query 17359 GTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || || |||||||| || |||||||| || Sbjct 8208 ATTGACAATGCCGTCAGAAGCCGCGAAAAATGC 8240 >seq6019 Length=9942 Score = 122 bits (134), Expect = 9e-23 Identities = 302/452 (67%), Gaps = 6/452 (1%) Strand=Plus/Minus Query 16943 TTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATA 17002 || ||||| | || | |||||| | || ||| || | |||||||| | |||||| Sbjct 2227 TTTAGATGGCTGAAGAGAAGACATCCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATG 2168 Query 17003 AGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCG 17062 || ||||| || || || | || |||||| || || ||||| |||||||| || | Sbjct 2167 AGCTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTCTTCAACCAAAAGATGGAA 2108 Query 17063 GCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCG 17122 || ||||| ||||| ||||| || || || |||| || || || | | || || || Sbjct 2107 GCAAACGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCGAAGGCTACAAGACGCTCAGCA 2048 Query 17123 TACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCA 17181 | || | | || | || ||||| | |||| || ||||| | || ||||| Sbjct 2047 AAGGTGGAA-CGTTCATCGGAGATCCAGCGAAGGGCCCAGTCAGCTTTGCGTTTGATGCA 1989 Query 17182 ATCCATCGTTTCTATGGCCTTAAATA-AT-TTCTCTTTTTCCTGTAGGTCGATTATATAC 17239 | || || || | || | ||| | || ||| || | | | |||| | || ||| Sbjct 1988 AGGAATGGTCTCGACAGCATCAAAAAGATATTCCCTCTGGGCGG--GGTCTTTGATGTAC 1931 Query 17240 GTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCG 17299 |||||||| || || || | ||||| || || |||||||| ||||| || || Sbjct 1930 GTATCGATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCCATCATGATCTGGAAGCCA 1871 Query 17300 TAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCG 17359 || ||||| || ||||| || | ||||| || |||| ||||| | ||||| ||| Sbjct 1870 TAGAAGCAACGAGCTTCAGCAACCTGAACCTCTTTCGAGAAACGTTCGACGAGATTCTCG 1811 Query 17360 TTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || |||||||||||| || || ||||| || Sbjct 1810 TTGACGATGCCGTCGGAAGCAGCAAAAAAAGC 1779 >seq4584 Length=6343 Score = 122 bits (134), Expect = 9e-23 Identities = 302/452 (67%), Gaps = 6/452 (1%) Strand=Plus/Minus Query 16943 TTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATA 17002 || ||||| | || | |||||| | || ||| || | ||||| || | |||||| Sbjct 3759 TTTAGATGGCTGAAGAGAAGACATCCAAAGTCGGTGTGCATGCCCTCATCACGGCTGATG 3700 Query 17003 AGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCG 17062 || ||||| || || || | || |||||| || || ||||| |||||||| || | Sbjct 3699 AGCTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTCTTCAACCAAAAGATGGAA 3640 Query 17063 GCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCG 17122 || || || ||||| ||||| || || || |||| ||||| || | | || ||||| Sbjct 3639 GCAAAAGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCAAAGGCTACGAGACGCTCGGCA 3580 Query 17123 TACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCA 17181 | || | | || | || ||||| | | |||| || ||||| | || ||||| Sbjct 3579 AAGGTGGAA-CGTTCATCGGAGATCCAGTGAAGGGCCCAGTCAGCTTTGCGTTTGATGCA 3521 Query 17182 ATCCATCGTTTCTATGGCCTTAAATA-AT-TTCTCTTTTTCCTGTAGGTCGATTATATAC 17239 | || || || ||||| | ||| | || ||| || | | | |||| | || || Sbjct 3520 AGGAATGGTCTCGATGGCATCAAAAAGATATTCCCTCTGGGCGG--GGTCTTTGATGTAT 3463 Query 17240 GTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCG 17299 || ||||| || || || | ||||| || || |||||||| ||||| || || Sbjct 3462 GTGTCGATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCCATCATGATCTGGAAACCA 3403 Query 17300 TAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCG 17359 || ||||| || ||||| || | |||||||| |||| ||||| | || || ||| Sbjct 3402 TAGAAGCAACGAGCTTCAGCAACCTGAACTTCTTTCGAGAAACGTTCGACGAGGTTCTCG 3343 Query 17360 TTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || ||||||||||| || || ||||| || Sbjct 3342 TTAACGATGCCGTCAGAAGCAGCAAAAAAGGC 3311 >seq4583 Length=9780 Score = 122 bits (134), Expect = 9e-23 Identities = 302/452 (67%), Gaps = 6/452 (1%) Strand=Plus/Minus Query 16943 TTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATA 17002 || ||||| | || | |||||| | || ||| || | |||||||| | |||||| Sbjct 7197 TTTAGATGGCTGAAGAGAAGACATCCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATG 7138 Query 17003 AGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCG 17062 || ||||| || || || | || |||||| || || ||||| |||||||| || | Sbjct 7137 AGCTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTCTTCAACCAAAAGATGGAA 7078 Query 17063 GCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCG 17122 || ||||| ||||| ||||| || || || |||| || || || | | || || || Sbjct 7077 GCAAACGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCGAAGGCTACAAGACGCTCAGCA 7018 Query 17123 TACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCA 17181 | || | | || | || ||||| | |||| || ||||| | || ||||| Sbjct 7017 AAGGTGGAA-CGTTCATCGGAGATCCAGCGAAGGGCCCAGTCAGCTTTGCGTTTGATGCA 6959 Query 17182 ATCCATCGTTTCTATGGCCTTAAATA-AT-TTCTCTTTTTCCTGTAGGTCGATTATATAC 17239 | || || || | || | ||| | || ||| || | | | |||| | || ||| Sbjct 6958 AGGAATGGTCTCGACAGCATCAAAAAGATATTCCCTCTGGGCGG--GGTCTTTGATGTAC 6901 Query 17240 GTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCG 17299 |||||||| || || || | ||||| || || |||||||| ||||| || || Sbjct 6900 GTATCGATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCCATCATGATCTGGAAGCCA 6841 Query 17300 TAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCG 17359 || ||||| || ||||| || | ||||| || |||| ||||| | ||||| ||| Sbjct 6840 TAGAAGCAACGAGCTTCAGCAACCTGAACCTCTTTCGAGAAACGTTCGACGAGATTCTCG 6781 Query 17360 TTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || |||||||||||| || || ||||| || Sbjct 6780 TTGACGATGCCGTCGGAAGCAGCAAAAAAAGC 6749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517387729184040