Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq6955 123 3e-23 >seq6955 Length=16480 Score = 123 bits (136), Expect = 3e-23 Identities = 384/585 (66%), Gaps = 17/585 (3%) Strand=Plus/Plus Query 16181 TTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATA 16240 || ||||| | |||| |||||||| ||||| || | || || || | || || Sbjct 7792 TTCAGGTGACTGAACAGCAGACACGCAAAGTCAGTGTGCATACCCTCATCACGACTAATG 7851 Query 16241 AGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCA 16300 || || ||||| ||||| | || ||||| ||| || ||||||||||| || || | Sbjct 7852 AGCTCATTGGAGAAAGTCAGACCAGGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGAC 7911 Query 16301 GCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCG 16360 ||||| || || |||||||| || ||||| ||||| ||||| || | || || |||||| Sbjct 7912 GCAAACGATCCAGAAAAGAAGATGCCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCGCG 7971 Query 16361 TACGTAGCATCTTTATTACGA-ATCCATTTCTGTA---CCCATTCGGCTTTTTGTTTTAT 16416 | || | | | | | || ||||| ||| |||| || || || ||||||| Sbjct 7972 AAGGT-GGAGCGATGGTCGGATATCCA---ACGTAAAGCCCAGTCAGCCTTGAGTTTTAT 8027 Query 16417 ACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAA-TATCGATTATAT 16475 || || ||||| || || | || | | || | | | ||| || | || | Sbjct 8028 GCATGGTATTGTTTCGATTGCATCGAAAAGGTAGTC-TCTCCGGGAAGGTTCCTTGATGT 8086 Query 16476 ACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATC 16535 | |||||||| || | || | || ||||| |||||||| || || ||||| | Sbjct 8087 AGGTATCAATGAGGAGGGAATATGTCTCAGAGTGGATGTTCTCCATCATGATTTGAAAGC 8146 Query 16536 CATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCT 16595 | || ||||| || ||||| || ||| || || ||||||| || ||||||||| Sbjct 8147 CGTAAAAGCAACGTGCCTCTGCGGCTTGCACCTCTTTCGAAAATCGCTCGACCAGGTTCT 8206 Query 16596 CATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTT 16655 |||| || || |||||| || || ||||| || | | ||| ||||| | | || Sbjct 8207 CATTGACAATGCCGTCAGAAGCCGCGAAAAATGCGAGGACGTGAGAGATGAAGTGATGTT 8266 Query 16656 CGTCAGATGTAAG---AATATGCCAATCTTTTAAATC--TTTGGATATATCCACTTCTTC 16710 | | |||| ||| ||| || | | || |||| || |||| |||||| Sbjct 8267 CATTTTCGTTAAGCTTGTTATTCCAGTCGTAGATGTCCATTTG--TAAGTCCATTTCTTC 8324 Query 16711 TGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 | ||||| || |||| | |||||||| ||||||| ||| || Sbjct 8325 AGCGGTCCAGAAAGAAGCCTCAGCCTTTTTGTACATTTCCCATAT 8369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511258399429960