Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq582 123 2e-23 seq580 114 1e-20 seq2531 95.1 1e-14 seq4313 84.2 2e-11 >seq582 Length=4044 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 118533 AAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGC 118592 ||||| | || ||||| || ||||||||||| ||| || ||| | |||||| ||| Sbjct 3596 AAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGC 3655 Query 118593 TGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATT 118652 ||||| |||||| |||| ||||||||||| || ||||| || |||||||| || ||| Sbjct 3656 TGTTTCCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATC 3715 Query 118653 TTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCG 118712 || || || | || | |||||| | ||||||||| | ||| | ||||| ||| Sbjct 3716 TTCGCCTTGACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCG 3775 Query 118713 GTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || || |||||||| Sbjct 3776 GTCAACGTCTTGACGAATATCTGCAT 3801 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || |||||||| |||||||| || || | ||||| ||| |||||||| || ||| Sbjct 3327 GTCGACTCTTTCTGAATGTTATAGTCAGAGAGCGTGCGACCATCTTCGAGCTGCTTGCCA 3386 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||||||||| |||||||| || || || || ||||||||| ||| || || Sbjct 3387 GCAAAGATGAGACGTTGCTGATCCGGCGGGATCCCTTCCTTGTCTTGAATCTTCGCCTTC 3446 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| | | ||| ||||| | || | || || || |||| || Sbjct 3447 ACGTTATCAATAGTGTCGGAGGACTCAACCTCTAACGTAATAGTCTTCCCAGTCAACGTC 3506 Query 118722 TTTACAAAAATCTGCAT 118738 || |||||||||||||| Sbjct 3507 TTGACAAAAATCTGCAT 3523 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || || || || ||||| | ||| || |||||| || || ||||| Sbjct 3099 GTAGACTCCTTCTGGATATTATAATCTGAAAGAGTACGACCATCCTCCAGTTGCTTTCCG 3158 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| ||||| ||||| || || || || ||||||||||| || || || Sbjct 3159 GCGAAGATCAGACGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCTTG 3218 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| | | |||||| || | || | || ||||| ||||| || Sbjct 3219 ACGTTGTCAATAGTGTCAGAGGACTCGACTTCCAACGTAATGGTCTTGCCCGTCAGCGTC 3278 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 3279 TTCACAAAGATCTGCAT 3295 Score = 84.2 bits (92), Expect = 2e-11 Identities = 122/171 (71%), Gaps = 1/171 (1%) Strand=Plus/Plus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| |||| || ||||| || |||||||| |||||| || ||||| ||| || Sbjct 3871 ACCAAGATGGAGGGTTGACTCCTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCTTC 3930 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||||| || || |||| | ||||| || || || || ||||||||||||||| Sbjct 3931 CAGCTGTTTCCCGGCAAAGATCAAGCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCTTG 3990 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGT 118699 || || || || | |||| ||||| | ||| ||||||| ||| Sbjct 3991 GATCTTGGCCTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCGAGGGT 4041 >seq580 Length=8796 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || |||||||| ||||||||||| || | || || |||||| |||||||| ||| Sbjct 8102 GTGGACTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCCATCCTCCAGCTGTTTGCCA 8161 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | |||||||||||||| |||||||| ||||| || ||||| ||| || ||| Sbjct 8162 GCAAAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATCTTGGCTTTC 8221 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | |||||||| ||||||||| | || | || || || ||||| || Sbjct 8222 ACGTTGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAGTCTTCCCCGTCAGGGTC 8281 Query 118722 TTTACAAAAATCTGCATG 118739 || || || || |||||| Sbjct 8282 TTGACGAAGATTTGCATG 8299 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 118531 CCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| || | ||| ||| || || || |||||||| || ||||| ||| || | Sbjct 7863 CCAAATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCA 7922 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTA 118649 |||| || || || | || || || |||||||||||||| || || ||||||| |||| Sbjct 7923 GCTGCTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGT- 7981 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||| |||| ||| ||||||| ||| | ||| || Sbjct 7982 ATCTTGGCCTTGACGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTA 8041 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || || || ||||| Sbjct 8042 CCAGTAAGGGTCTTGACGAAGATTTGCAT 8070 >seq2531 Length=57720 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 |||||||||||| | || ||||| || || |||||||| || |||| || || ||| Sbjct 24801 CAACACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCACTCAAGGTACGGCCATC 24742 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 ||||||||| || |||||| |||||||||| || || || ||||| |||| Sbjct 24741 CTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCAGGAGGGATGC 24692 >seq4313 Length=23148 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 || ||||| | || |||||||| || |||||||| ||||||| || || ||||||| Sbjct 10878 ACTAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCG 10819 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 || || || || || |||||||||||||||| || || || |||| Sbjct 10818 AGTTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGAATGC 10773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433701373822876