Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq580 95.1 1e-14 seq582 86.0 7e-12 >seq580 Length=8796 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 42976 CCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTA 43035 ||||||| | || |||||||| || ||||||||||| | || || || | || || | Sbjct 7863 CCAAATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCA 7922 Query 43036 GCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGA 43095 ||||||| || || || || ||||| ||||| |||| || | | ||||||||| | Sbjct 7923 GCTGCTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTA 7982 Query 43096 TTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 | || |||| ||| | | | || || || ||||| |||| ||||| || || Sbjct 7983 TCTTGGCCTTGA-CGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTA 8041 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || ||||| || ||||||||||| Sbjct 8042 CCAGTAAGGGTCTTGACGAAGATTTGCAT 8070 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || ||||| ||||| |||| || || || | || || ||||| || ||||| || Sbjct 8107 CTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCCATCCTCCAGCTGTTTGCCAGCAAA 8166 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || || |||||| ||| | || | || ||| Sbjct 8167 AATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCC-TGAATCTTGGCTTTCACGT 8225 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || || || || | || || || || ||||| || ||||| | Sbjct 8226 TGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAGTCTTCCCCGTCAGGGTCTTGA 8285 Query 43171 CAAAGATTTGCAT 43183 | ||||||||||| Sbjct 8286 CGAAGATTTGCAT 8298 >seq582 Length=4044 Score = 86.0 bits (94), Expect = 7e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| || | || ||||| | || || ||||| || |||||||| Sbjct 3610 CTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGCTGTTTCCCAGCGAA 3669 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||||||||| | || | | |||||| ||| ||| | || | |||| Sbjct 3670 GATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCC-TGAATCTTCGCCTTGACAT 3728 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||| || || || | || |||||||| || || | |||||| | Sbjct 3729 TGTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCGGTCAACGTCTTGA 3788 Query 43171 CAAAGATTTGCATT 43184 | || || |||||| Sbjct 3789 CGAATATCTGCATT 3802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571643174188840