Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq580 95.1 8e-15 seq582 87.8 1e-12 >seq580 Length=8796 Score = 95.1 bits (104), Expect = 8e-15 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| |||||||| |||||||||||||| || ||| | || Sbjct 8315 AGGACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATCT 8374 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCT 34287 |||||||||||||||||||||||||| ||||| |||||| ||| | ||| Sbjct 8375 TCCAACTGCTTGCCTGCGAAAATGAGGCGCTGTTGGTCGGGGGGAATGCT 8424 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| ||||||||||| || || ||| | || |||| ||| ||||| || ||| Sbjct 8108 TCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCCATCCTCCAGCTGTTTGCCAGCAAAA 8167 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317 ||||| |||||||||||| || | || || ||||| ||| || ||||| | | Sbjct 8168 ATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATC-TTGGCTTTCACGTT 8226 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | || | || ||||| |||| || || || || || || || || || || Sbjct 8227 GTCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAGTCTTCCCCGTCAGGGTCTTGAC 8286 Query 34378 AAAGATCTGCAT 34389 ||||| ||||| Sbjct 8287 GAAGATTTGCAT 8298 >seq582 Length=4044 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| || || || || || || ||| | || |||| ||||| || ||||| Sbjct 3105 TCCTTCTGGATATTATAATCTGAAAGAGTACGACCATCCTCCAGTTGCTTTCCGGCGAAG 3164 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || || |||||||| ||| | | ||||||||| ||||| ||| | | | Sbjct 3165 ATCAGACGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 3224 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || ||||| |||| ||| ||||| ||||| || || || |||||| Sbjct 3225 TCAATAGTGTCAGAGGACTCGACTTCCAACGTAATGGTCTTGCCCGTCAGCGTCTTCACA 3284 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 3285 AAGATCTGCAT 3295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322975914651680