Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq580 107 2e-18 seq582 87.8 1e-12 >seq580 Length=8796 Score = 107 bits (118), Expect = 2e-18 Identities = 149/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||| ||||||||||||||||| ||| || | || ||||| || Sbjct 8095 GTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCCATCCTCCAGCTG 8154 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||| || || || || | ||||| ||||||||||| | || || |||||| || | | Sbjct 8155 TTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCCTGAA-TCT 8213 Query 45253 TTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCG 45311 | |||| || | | | | ||||| ||| ||||||| ||||| ||||| |||| Sbjct 8214 TGGCTTTCACGTTGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAGTCTTCCCCG 8273 Query 45312 TCAGAGTCTTCACAAAGATTTGCATG 45337 |||| ||||| || |||||||||||| Sbjct 8274 TCAGGGTCTTGACGAAGATTTGCATG 8299 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 45129 CCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || || ||||||||||| || ||||| || || ||| | || |||| Sbjct 7863 CCAAATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCA 7922 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || ||||| || || | || || || |||||||| | ||| ||||||||| | Sbjct 7923 GCTGCTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTA 7982 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | | ||| | ||||||||| | ||| |||||||| | Sbjct 7983 TCTTGGCCTTGACGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTAC 8042 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || || ||||| || ||||||||||| Sbjct 8043 CAGTAAGGGTCTTGACGAAGATTTGCAT 8070 >seq582 Length=4044 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 45131 AAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGT 45190 ||||| || || |||||||||||||||||||||| || | | || || || Sbjct 3596 AAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGC 3655 Query 45191 TGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATT 45250 ||||| || ||||| |||| ||||| ||||| ||||| | ||||||||| ||| ||| Sbjct 3656 TGTTTCCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATC 3715 Query 45251 TTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCC 45310 || ||| || | | | |||| ||| ||||| | |||||| || || || Sbjct 3716 TTCGCCTTGACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCG 3775 Query 45311 GTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||||| || || || ||||| Sbjct 3776 GTCAACGTCTTGACGAATATCTGCAT 3801 Score = 87.8 bits (96), Expect = 1e-12 Identities = 91/118 (77%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 45127 TACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGT 45185 ||||||| || || || ||||||||||||||| || ||| ||| ||| | || | Sbjct 3870 TACCAAGATGGAGGGTTGACTCCTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCTT 3929 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 |||| ||||| ||||| || ||||| ||||||||||| || || | ||||||||||| Sbjct 3930 CCAGCTGTTTCCCGGCAAAGATCAAGCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTC 3987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394957700067463