Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq582 89.7 4e-13 >seq582 Length=4044 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||||||||| || || || || ||||| ||||| || ||| | || ||||| ||| Sbjct 3801 ATGCAGATATTCGTCAAGACGTTGACCGGAAAAACCATTACCCTTGAGGTCGAGTCGTCT 3742 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTA--CCGGTTGACC 24949 |||| | || | ||| |||| || ||| | | | ||| ||| ||| || |||| Sbjct 3741 GACACCATTGACAATGTCAAGGCGAAGATT-CAGGATAAGGAGG-GTATTCCTCCAGACC 3684 Query 24950 AGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACA 25009 |||| ||| | || | || || ||||| || || ||| || |||| || ||| |||| Sbjct 3683 AGCAGCGTCTGATCTTCGCTGGGAAACAGCTTGAGGATGGCAGGACTTTGTCCGACTACA 3624 Query 25010 GCATACAGAAAGAGGCCACGCTTCATTTAG 25039 ||| ||||| ||| | || ||||| |||| Sbjct 3623 ACATTCAGAAGGAGTCAACTCTTCACTTAG 3594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418179591553760