Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq6955 147 3e-30 seq4646 104 3e-17 >seq6955 Length=16480 Score = 147 bits (162), Expect = 3e-30 Identities = 373/566 (66%), Gaps = 6/566 (1%) Strand=Plus/Plus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || ||| || || || ||||| |||||| || | |||||| | || || || Sbjct 7804 AACAGCAGACACGCAAAGTCAGTGTGCATACCCTCATCACGACTAATGAGCTCATTGGAG 7863 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || || || || ||||| || || ||||| || | |||||| ||||| || || ||||| Sbjct 7864 AAAGTCAGACCAGGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGACGCAAACGATCCA 7923 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC-- 33750 ||||||||||| || ||||| | ||||||||||| || | ||| | | || || Sbjct 7924 GAAAAGAAGATGCCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCGCGAAGGTGGAGCGA 7983 Query 33751 -TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 33809 ||| |||||| | |||||| || ||||| ||||| || || || ||||| Sbjct 7984 TGGTCGGATATCCAACGTAAAGCCCAGTCAGCCTTGAGTTTTATGCATGGTATTGTTTCG 8043 Query 33810 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 33869 || |||| || || |||| | | | || || | || ||||| || | || Sbjct 8044 ATTGCATCGAAAAGGTAGTCTCTCCGGGAAGGTTCCTTGATGTAGGTATCAATGAGGAGG 8103 Query 33870 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 33929 ||| | || || || ||||| || || || ||||| ||||| || || | ||| Sbjct 8104 GAATATGTCTCAGAGTGGATGTTCTCCATCATGATTTGAAAGCCGTAAAAGCAACGTGCC 8163 Query 33930 TCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCA 33989 || | ||||| ||| | ||||||| || | | || ||||| || || || ||| Sbjct 8164 TCTGCGGCTTGCACCTCTTTCGAAAATCGCTCGACCAGGTTCTCATTGACAATGCCGTCA 8223 Query 33990 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAG---T 34046 || || ||||| || | || || || || | | ||| | | | || Sbjct 8224 GAAGCCGCGAAAAATGCGAGGACGTGAGAGATGAAGTGATGTTCATTTTCGTTAAGCTTG 8283 Query 34047 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 34106 |||||||| || | ||| || | || |||| |||||| | ||||| || || ||| Sbjct 8284 TTATTCCAGTCGTAGATGTCCATTTGTAAGTCCATTTCTTCAGCGGTCCAGAAAGAAGCC 8343 Query 34107 TCTGCCTTTTTATACATATTCCAGAT 34132 || |||||||| ||||| | ||| || Sbjct 8344 TCAGCCTTTTTGTACATTTCCCATAT 8369 >seq4646 Length=10087 Score = 104 bits (114), Expect = 3e-17 Identities = 232/344 (67%), Gaps = 6/344 (2%) Strand=Plus/Plus Query 63516 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63575 ||| | |||||||||||| ||| ||||| || || || ||| | || || | Sbjct 5059 CCAGTAGCACGAATATTATGAATGCTGAGACCAATACCACCGGCCGTCTTGCTAATCATG 5118 Query 63576 GCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGA 63635 ||||| | || | ||||| ||||||||||||||| ||| || ||||| || || Sbjct 5119 GCGCAGCTCTTCAGGGTGTCGTAGATGCCTTCTATGGAATCGTCCTTCATGCAAACGAGG 5178 Query 63636 AAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 63695 || || || | || || | | || || || || |||||||| || || |||||| Sbjct 5179 AAGCAAGATGAGAGCTGAGGATGGGGTGTCCCAGCGTTGAATAAGGTCGGCGACGCGTGC 5238 Query 63696 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT-- 63753 ||||| | ||||| | |||||||| ||||| | | ||| |||| |||| Sbjct 5239 GTAAAGTACCGCTCAGACATGAGATTGTATGTCTCGAGCACGCGGTCAATAT--CATTAC 5296 Query 63754 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGT 63813 ||||| || || || |||||||||| ||| |||||||| | ||| ||| || Sbjct 5297 CATGAACGCCGACGGCTACACGCATTATCATATGCTGAGGACGCTCAGCAA-CACGTCCA 5355 Query 63814 TTATTTTCAACAA-GTAGGATTTTTCCAAAGTTTTAAAACCAAA 63856 || || || ||| ||| ||||||||| ||||||||||| Sbjct 5356 TTGAGACGAAGAAGGTATGATCGTTCCAAAGTCTTAAAACCAAA 5399 Score = 93.3 bits (102), Expect = 5e-14 Identities = 152/215 (71%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 63274 TCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTTGTTCTATGTTCCTCG 63332 ||| ||| || |||| |||||| || || || ||| ||||| | || | || || Sbjct 4767 TCACAAA-AGGTCAGAAATCCATAGGGCGTAGAAA-AGATCGCGTGCACGGCTCTCTTCC 4824 Query 63333 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63392 || || |||||| ||||||||||||| | | ||| |||| |||||| ||||| | | Sbjct 4825 TTGCCGTGATTCTTGCGAAGATCGAGGAACTCAAAAATGTCAGGATGCCAAGGTTCAAGG 4884 Query 63393 TATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63452 |||||||| | |||| || ||||| ||||| || ||||| | || | || ||| | Sbjct 4885 TATATGGCAAATGCTCCGGGACGTTTATTTCCACCTTGATCGACATAGCGCGCAGTGGCA 4944 Query 63453 TTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 | ||| ||| | ||| ||||| ||||| || || Sbjct 4945 TCATATGCTCGGAGCATAGGAATGATACCATTAGA 4979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629625482013840