Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq6955 120 3e-22 >seq6955 Length=16480 Score = 120 bits (132), Expect = 3e-22 Identities = 429/662 (65%), Gaps = 18/662 (3%) Strand=Plus/Plus Query 11537 GTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTATCGACGTTATAACTTCCTTA 11596 ||||||||||| | |||||||| || || |||| ||| || || | |||| || Sbjct 7720 GTCAAAAACTCTTGCTCTATATTCACAGCCTCAACGATGATACACTCAACGACTT--TTG 7777 Query 11597 GATGGTG--GATGTAATAAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTT 11654 |||| | || || | || | |||| | ||||||||| ||| || | ||| | Sbjct 7778 GATGTGGACGACGTTTCAGGTGACTGAACAGCAGACACGCAAAGTCAGTGTGCATACCCT 7837 Query 11655 CGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttA 11714 | || | ||| || || ||||| || || || | || ||||||| ||| || || |||| Sbjct 7838 CATCACGACTAATGAGCTCATTGGAGAAAGTCAGACCAGGCATCAGTCCCCGCTTCTTTA 7897 Query 11715 TCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTA 11774 |||||| || | ||||| || ||||||||||| || ||||| |||| ||||| || | Sbjct 7898 ACCAAAAGATGGACGCAAACGATCCAGAAAAGAAGATGCCCTCTACAGAAGCAAAGGCAA 7957 Query 11775 CTACTCTTTCTCC--ATATACCTTGTTGCT-AGATATCCATTTTCTGGCCCAATCAGCTT 11831 ||| | || | | | | || | |||||||| | ||||| ||||| | Sbjct 7958 CTAGCCGCTCCGCGAAGGTGGAGCGATGGTCGGATATCCAACGTAAAGCCCAGTCAGCCT 8017 Query 11832 TCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAAATGCATTTTTTC--TATATT 11889 | ||||| |||| |||||||| || || | | ||| | | | | || | Sbjct 8018 TGAGTTTTATGCATGGTATTGTTTCGATTGCATCGA--AAAGGTAGTCTCTCCGGGAAGG 8075 Query 11890 ATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGC 11949 || | | || ||||| || | | ||| | || || || || || ||||| Sbjct 8076 TTCCTTGATGTAGGTATCAATGAGGAGGGAATATGTCTCAGAGTGGATGTTCTCCATCAT 8135 Query 11950 TATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTC 12009 |||||||| || || || || |||||||||| || || || |||||| || Sbjct 8136 GATTTGAAAGCCGTAAAAGCAACGTGCCTCTGCGGCTTGCACCTCTTTCGAAAATCGCTC 8195 Query 12010 CGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTAT 12069 | | |||||||| ||||| || ||| || || |||||||| || | || || Sbjct 8196 GACCAGGTTCTCATTGACAATGCCGTCAGAAGCCGCGAAAAATGCGAGGACGTGAGAGAT 8255 Query 12070 AAAGTATTTTTCGTCTTTAGTTAA----TTTATCCCAATCATCTAAATCTTTTGATAAAT 12125 |||| | ||| | ||| ||||| |||| ||| || | | || || ||| | Sbjct 8256 GAAGTGATGTTCAT-TTTCGTTAAGCTTGTTATTCCAGTCGTAGATGTCCATTTGTAAGT 8314 Query 12126 CTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCAT 12185 | | ||||||| ||||||| ||| ||| | | | ||| ||||||| || ||||| | Sbjct 8315 CCATTTCTTCAGCGGTCCAGAAAGAAGCCTCAGCCTTTTTGTACATTTCCC--ATATCTT 8372 Query 12186 GA 12187 || Sbjct 8373 GA 8374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468381882366320