Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq6955 161 1e-34 seq4646 93.3 6e-14 >seq6955 Length=16480 Score = 161 bits (178), Expect = 1e-34 Identities = 376/566 (66%), Gaps = 6/566 (1%) Strand=Plus/Plus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| || ||| || || || ||| | |||||| || | |||||| | || ||||| Sbjct 7804 AACAGCAGACACGCAAAGTCAGTGTGCATACCCTCATCACGACTAATGAGCTCATTGGAG 7863 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || || || || ||||| || || ||||| || | |||||| ||||||||||| |||||| Sbjct 7864 AAAGTCAGACCAGGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGACGCAAACGATCCA 7923 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CA 36325 |||||||| || || ||||| | |||||||||| || | ||| | | || | Sbjct 7924 GAAAAGAAGATGCCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCGCGAAGGTGGAGCGA 7983 Query 36326 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 36385 ||| |||||| | |||||| || ||||| ||||| || || ||||| || Sbjct 7984 TGGTCGGATATCCAACGTAAAGCCCAGTCAGCCTTGAGTTTTATGCATGGTATTGTTTCG 8043 Query 36386 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 36445 || |||| || || |||| | | | || || | || |||||||| | || Sbjct 8044 ATTGCATCGAAAAGGTAGTCTCTCCGGGAAGGTTCCTTGATGTAGGTATCAATGAGGAGG 8103 Query 36446 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCC 36505 ||| | || || || ||||| || || |||||||| ||||| || || | ||| Sbjct 8104 GAATATGTCTCAGAGTGGATGTTCTCCATCATGATTTGAAAGCCGTAAAAGCAACGTGCC 8163 Query 36506 TCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 36565 || | || || ||| | ||||||| || | | || ||||| || || |||||| Sbjct 8164 TCTGCGGCTTGCACCTCTTTCGAAAATCGCTCGACCAGGTTCTCATTGACAATGCCGTCA 8223 Query 36566 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAG---T 36622 || || ||||| || | || || || || | | ||| ||| | || Sbjct 8224 GAAGCCGCGAAAAATGCGAGGACGTGAGAGATGAAGTGATGTTCATTTTCGTTAAGCTTG 8283 Query 36623 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 36682 |||||||| || | ||| || | || |||| |||||| | ||||| || || ||| Sbjct 8284 TTATTCCAGTCGTAGATGTCCATTTGTAAGTCCATTTCTTCAGCGGTCCAGAAAGAAGCC 8343 Query 36683 TCTGCCTTTTTATACATATTCCAGAT 36708 || |||||||| ||||| | ||| || Sbjct 8344 TCAGCCTTTTTGTACATTTCCCATAT 8369 >seq4646 Length=10087 Score = 93.3 bits (102), Expect = 6e-14 Identities = 120/163 (74%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 66134 ATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGC 66193 |||||| ||||||||||||| | | ||| ||| |||||| ||||| | ||||||||| Sbjct 4833 ATTCTTGCGAAGATCGAGGAACTCAAAAATGTCAGGATGCCAAGGTTCAAGGTATATGGC 4892 Query 66194 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 66253 | |||| || ||||| ||||| || ||||| | || | || ||| || ||| | Sbjct 4893 AAATGCTCCGGGACGTTTATTTCCACCTTGATCGACATAGCGCGCAGTGGCATCATATGC 4952 Query 66254 TCTCAACATTGGAATAATACCATTGGATGTA-CCATTGGTCCC 66295 || | ||| ||||| |||||||| || ||| ||||| || || Sbjct 4953 TCGGAGCATAGGAATGATACCATTAGA-GTACCCATTCGTTCC 4994 Score = 89.7 bits (98), Expect = 7e-13 Identities = 229/344 (67%), Gaps = 6/344 (2%) Strand=Plus/Plus Query 66309 CCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 66368 ||| | |||||||||||| ||| ||||| || || || ||| | || || | Sbjct 5059 CCAGTAGCACGAATATTATGAATGCTGAGACCAATACCACCGGCCGTCTTGCTAATCATG 5118 Query 66369 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 66428 ||||| | || | || || |||||||| ||||| ||| ||| ||||| || || Sbjct 5119 GCGCAGCTCTTCAGGGTGTCGTAGATGCCTTCTATGGAATCGTCCTTCATGCAAACGAGG 5178 Query 66429 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 66488 || || || | || || | || || || || |||||||| || || |||||| Sbjct 5179 AAGCAAGATGAGAGCTGAGGATGGGGTGTCCCAGCGTTGAATAAGGTCGGCGACGCGTGC 5238 Query 66489 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT-- 66546 ||||| | ||||| | |||||||| ||||| | | ||| |||| |||| Sbjct 5239 GTAAAGTACCGCTCAGACATGAGATTGTATGTCTCGAGCACGCGGTCAATAT--CATTAC 5296 Query 66547 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 66606 ||||| || || || |||||||||| ||| |||||||| | ||| | | | || Sbjct 5297 CATGAACGCCGACGGCTACACGCATTATCATATGCTGAGGACGCTCAGC-AACACGTCCA 5355 Query 66607 TTATTTTCAACAA-GTAGGATTTTTCCAAAGTTTTAAAACCAAA 66649 || || || ||| ||| ||||||||| ||||||||||| Sbjct 5356 TTGAGACGAAGAAGGTATGATCGTTCCAAAGTCTTAAAACCAAA 5399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657972032614520