Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq6019 86.0 4e-12 seq4583 86.0 4e-12 >seq6019 Length=9942 Score = 86.0 bits (94), Expect = 4e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 ||||| | ||||| || || ||||||||| | | || ||||| || ||||| |||| Sbjct 2055 CGTCTTGTAGCCTTCGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCTTCCATC 2114 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 || ||| ||||||| ||| | ||||| || | |||| || |||||| | || ||| Sbjct 2115 TTTTGGTTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGC 2174 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCA 22907 |||||||| || | ||| ||||||| ||| | || || || || Sbjct 2175 CGTGACGAGGGCATGCACACCGACTTTGGATGTCTTCTCTTCAGCCA 2221 >seq4583 Length=9780 Score = 86.0 bits (94), Expect = 4e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 ||||| | ||||| || || ||||||||| | | || ||||| || ||||| |||| Sbjct 7025 CGTCTTGTAGCCTTCGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCTTCCATC 7084 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 || ||| ||||||| ||| | ||||| || | |||| || |||||| | || ||| Sbjct 7085 TTTTGGTTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGC 7144 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCA 22907 |||||||| || | ||| ||||||| ||| | || || || || Sbjct 7145 CGTGACGAGGGCATGCACACCGACTTTGGATGTCTTCTCTTCAGCCA 7191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356127652008409