Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq582 113 4e-20 seq580 102 8e-17 >seq582 Length=4044 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| | || | ||| |||||||| ||||||||||| || Sbjct 3297 CCACCGCGAAGACGGAGAACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGAG 3356 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||||||||| || |||||| |||| |||||||||||||| || || Sbjct 3357 AGCGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGGG 3416 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| | || | || | | || | ||||||| || ||| || Sbjct 3417 ATCCCTTCCTTGTC-TTGAATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAAC 3475 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | || | ||||| || |||||||| || || || || |||||| Sbjct 3476 CTCTAACGTAATAGTCTTCCCAGTCAACGTCTTGACAAAAATCTGCATA 3524 Score = 109 bits (120), Expect = 5e-19 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 139557 CTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGA 139616 ||||||||| || ||||| || |||||||| || ||| || || || || || | Sbjct 3594 CTAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAA 3653 Query 139617 GCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGA 139676 ||||||| ||||| |||||||||| ||||| || ||||| || || || || || ||| Sbjct 3654 GCTGTTTCCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCC-TGA 3712 Query 139677 TTTTTTGTTTTAGCTGTTCCACTG-TGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 | || | || | | || || |||| | | ||| ||||||| ||| | || || Sbjct 3713 ATCTTCGCCTTGACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTT 3772 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||||| || |||||||| ||||| Sbjct 3773 CCGGTCAACGTCTTGACGAATATCTGCAT 3801 >seq580 Length=8796 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || | ||||| || |||||||| |||||||| || || Sbjct 8072 CCACCACGGAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAG 8131 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| | || || |||||||| |||||| | || ||||| ||||| |||||||| Sbjct 8132 AGTGTTCGGCCATCCTCCAGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGA 8191 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||||||||| ||| | || | ||| | | || | ||||| | | ||| || Sbjct 8192 ATGCCTTCTTTGTC-CTGAATCTTGGCTTTCACGTTGTCAATGGTGTCCGATGACTCGAC 8250 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | ||||| || |||| || || ||||| |||||||| Sbjct 8251 CTCCAGTGTAATAGTCTTCCCCGTCAGGGTCTTGACGAAGATTTGCAT 8298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495912681877600