Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq4584 183 4e-41 seq6955 176 6e-39 seq4646 102 1e-16 >seq4584 Length=6343 Score = 183 bits (202), Expect = 4e-41 Identities = 376/558 (67%), Gaps = 6/558 (1%) Strand=Plus/Minus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 |||| | || ||| ||||| ||||| || | || || || ||||| || |||||||| Sbjct 3739 ACATCCAAAGTCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTTGAGAACGTGAG 3680 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || ||||| | ||||||||| || | |||||| ||||| ||||| || ||||| ||||| Sbjct 3679 ACCAGGCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGCAAAAGAGCCAGAGAAGAA 3620 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCAT---G 50135 || ||||| || ||||||||||| || || | ||| || | ||| | |||| Sbjct 3619 AATGCCTTCAACGGCGGCAAAGGCTACGAGACGCTCGGCAAAGGTGGAACGTTCATCGGA 3560 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | | ||||| || || || ||| | ||||| || || || ||||||| Sbjct 3559 GATCCAGTGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGATGGCATC 3500 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 ||| ||||| | | | ||||| | || || ||||| | ||| ||| | Sbjct 3499 AAAAAGATATTCCCTCTGGGCGGGGTCTTTGATGTATGTGTCGATAAGGAGAGAATAGGT 3440 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 || |||||||| || || || ||||| || || ||||| || | ||| || | || Sbjct 3439 CTCGGAATGAATATTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCTTCAGCAAC 3380 Query 50316 CTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375 ||| |||||| | | || ||||| | | || || || || || |||||| || || Sbjct 3379 CTGAACTTCTTTCGAGAAACGTTCGACGAGGTTCTCGTTAACGATGCCGTCAGAAGCAGC 3320 Query 50376 AAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTG---GGTGTTAGTTTATTCCA 50432 |||||| || | ||||| |||||||| || ||| || | || ||||| Sbjct 3319 AAAAAAGGCGAGAACATGAGAGATAAAATGACGCTCATTGTCATTCATTCGGTTGTTCCA 3260 Query 50433 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 50492 || | || ||| ||||| | || | || || | ||||| || |||||||| || Sbjct 3259 GTCGTGGAGATCCTTAGACAGGTCCATCTCCTCGGCAGTCCAGAACGATGCCTCGTGTTT 3200 Query 50493 TTTATACATATTCCAGAT 50510 || ||||| | |||||| Sbjct 3199 CTTGTACATCTGCCAGAT 3182 >seq6955 Length=16480 Score = 176 bits (194), Expect = 6e-39 Identities = 382/569 (67%), Gaps = 12/569 (2%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || ||| || || || ||||| |||||| || | |||||| || || ||||| Sbjct 7804 AACAGCAGACACGCAAAGTCAGTGTGCATACCCTCATCACGACTAATGAGCTCATTGGAG 7863 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || || ||||| || || ||||| || | |||||| ||||||||||| || ||| Sbjct 7864 AAAGTCAGACCAGGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGACGCAAACGATCCA 7923 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC-- 50128 ||||||||||| || ||||| | ||||||||||| || | ||| | | ||| || Sbjct 7924 GAAAAGAAGATGCCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCGCGAAGGTGGAGCGA 7983 Query 50129 -TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 ||| |||||| | |||||| || ||||| ||||| || || || ||||| Sbjct 7984 TGGTCGGATATCCAACGTAAAGCCCAGTCAGCCTTGAGTTTTATGCATGGTATTGTTTCG 8043 Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 50247 || |||| || || |||| | | | || || | || ||||| || | || Sbjct 8044 ATTGCATCGAAAAGGTAGTCTCTCCGGGAAGGTTCCTTGATGTAGGTATCAATGAGGAGG 8103 Query 50248 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 50307 ||| | || || || ||||| || || || ||||| ||||| || || | ||| Sbjct 8104 GAATATGTCTCAGAGTGGATGTTCTCCATCATGATTTGAAAGCCGTAAAAGCAACGTGCC 8163 Query 50308 TCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCA 50367 || | ||||| ||| | ||||||| || | | || ||||| || || |||||| Sbjct 8164 TCTGCGGCTTGCACCTCTTTCGAAAATCGCTCGACCAGGTTCTCATTGACAATGCCGTCA 8223 Query 50368 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAA---ATGT---TTTTCGTTGGGTGTT 50421 || || ||||| || | || || || || |||| |||||||| | | Sbjct 8224 GAAGCCGCGAAAAATGCGAGGACGTGAGAGATGAAGTGATGTTCATTTTCGTTAAGCTT- 8282 Query 50422 AGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGAT 50481 |||||||| || | ||| || | || || | |||||| | ||||| || || Sbjct 8283 --GTTATTCCAGTCGTAGATGTCCATTTGTAAGTCCATTTCTTCAGCGGTCCAGAAAGAA 8340 Query 50482 GCCTCTGCCTTTTTATACATATTCCAGAT 50510 ||||| |||||||| ||||| | ||| || Sbjct 8341 GCCTCAGCCTTTTTGTACATTTCCCATAT 8369 >seq4646 Length=10087 Score = 102 bits (112), Expect = 1e-16 Identities = 165/231 (71%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 79946 TCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCG 80004 ||| ||| || |||| |||||| || || || ||| ||||| | | | ||| || Sbjct 4767 TCACAAA-AGGTCAGAAATCCATAGGGCGTAGAAA-AGATCGCGTGCACGGCTCTCTTCC 4824 Query 80005 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 80064 || || |||||| ||||||||||||| | | ||| |||| |||||| ||||| | | Sbjct 4825 TTGCCGTGATTCTTGCGAAGATCGAGGAACTCAAAAATGTCAGGATGCCAAGGTTCAAGG 4884 Query 80065 TATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 80124 |||||||| | |||| || ||||| ||||| || ||||| | || | || ||| | Sbjct 4885 TATATGGCAAATGCTCCGGGACGTTTATTTCCACCTTGATCGACATAGCGCGCAGTGGCA 4944 Query 80125 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTA-CCATTGGTCCC 80174 | ||| ||| | ||| ||||| |||||||| || ||| ||||| || || Sbjct 4945 TCATATGCTCGGAGCATAGGAATGATACCATTAGA-GTACCCATTCGTTCC 4994 Score = 89.7 bits (98), Expect = 7e-13 Identities = 229/344 (67%), Gaps = 6/344 (2%) Strand=Plus/Plus Query 80188 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 80247 ||| | |||||||||||| ||| ||||| || || || ||| | || || | Sbjct 5059 CCAGTAGCACGAATATTATGAATGCTGAGACCAATACCACCGGCCGTCTTGCTAATCATG 5118 Query 80248 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGA 80307 ||||| | || | || || |||||||| |||||| ||| || ||||| || || Sbjct 5119 GCGCAGCTCTTCAGGGTGTCGTAGATGCCTTCTATGGAATCGTCCTTCATGCAAACGAGG 5178 Query 80308 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 80367 || || || | || || | || || || || |||||||| || || |||||| Sbjct 5179 AAGCAAGATGAGAGCTGAGGATGGGGTGTCCCAGCGTTGAATAAGGTCGGCGACGCGTGC 5238 Query 80368 GTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATT-- 80425 ||||| | ||||||| |||||||| ||||| | | || |||| |||| Sbjct 5239 GTAAAGTACCGCTCAGACATGAGATTGTATGTCTCGAGCACGCGGTCAATAT--CATTAC 5296 Query 80426 GATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT-TA 80484 ||||| || || || |||||||||| ||| |||||||| | ||| | | | || | Sbjct 5297 CATGAACGCCGACGGCTACACGCATTATCATATGCTGAGGACGCTCAGC-AACACGTCCA 5355 Query 80485 TTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAA 80528 || | | | ||| ||| ||||||||| ||||||||||| Sbjct 5356 TTGAGACGAAGAAGGTATGATCGTTCCAAAGTCTTAAAACCAAA 5399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718049701080920