Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq6955 176 4e-39 >seq6955 Length=16480 Score = 176 bits (194), Expect = 4e-39 Identities = 437/656 (67%), Gaps = 13/656 (2%) Strand=Plus/Plus Query 13566 AGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATT 13625 ||| ||||| |||| |||||| ||||||||| || ||| || || | | || Sbjct 7719 AGTCAAAAACTCTTGCTCTATATTCACAGCCTCAACGATGATACACTCAACGACTT--TT 7776 Query 13626 AGAAG--GAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCC 13683 || | || || ||| || || | || | | ||||||||| ||| || | ||| Sbjct 7777 GGATGTGGACGACGTTTCAGGTGACTGAACAGCAGACACGCAAAGTCAGTGTGCATACCC 7836 Query 13684 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 13743 ||||| | |||||| || || || || || || | || ||||||| ||| || || ||| Sbjct 7837 TCATCACGACTAATGAGCTCATTGGAGAAAGTCAGACCAGGCATCAGTCCCCGCTTCTTT 7896 Query 13744 AACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCT 13803 |||||||| || | || || ||||| |||||||| || ||||| || | |||||| || Sbjct 7897 AACCAAAAGATGGACGCAAACGATCCAGAAAAGAAGATGCCCTCTACAGAAGCAAAGGCA 7956 Query 13804 ATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAt 13863 | ||| || || | || | | | || |||||||| | |||||| |||| Sbjct 7957 ACTAGCCGCTCCGCGAAGGTGGAGCGATGGTCGGATATCCAACGTAAAGCCCAGTCAGCC 8016 Query 13864 ttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG-- 13921 || ||| || | |||||||||||||||| ||| | | || || || Sbjct 8017 TTGAGTTTTATGCATGGTATTGTTTCGATTGCATCGAAAAGGTAGTCTCTCCGGGAAGGT 8076 Query 13922 TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAG 13981 | |||| ||||| |||||||| || | | ||| | |||||||| ||||| || || Sbjct 8077 TCCTTG--ATGTAGGTATCAATGAGGAGGGAATATGTCTCAGAGTGGATGTTCTCCATCA 8134 Query 13982 CTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTT 14041 || ||||| || ||||| || | || |||| ||| ||||| |||||| | Sbjct 8135 TGATTTGAAAGCCGTAAAAGCAACGTGCCTCTGCGGCTTGCACCTCTTTCGAAAATCGCT 8194 Query 14042 CTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAA 14101 | ||| ||| ||||| ||||| || ||| ||| || |||||||| | | || | Sbjct 8195 CGACCAGGTTCTCATTGACAATGCCGTCAGAAGCCGCGAAAAATGCGAGGACGTGAGAGA 8254 Query 14102 TAAAGTATTGCTCTTCATTGTTGAG---TTTTTTCCAATCGGCTAAATCC-TTAGAAAGA 14157 | |||| || || | | ||| || || ||||| ||| | ||| || | ||| Sbjct 8255 TGAAGTGATGTTCATTTTCGTTAAGCTTGTTATTCCAGTCGTAGATGTCCATTTGTAAG- 8313 Query 14158 TCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14213 || | ||| ||| | ||||| ||| ||| |||| ||||| |||||| ||||||| Sbjct 8314 TCCATTTCTTCAGCGGTCCAGAAAGAAGCCTCAGCCTTTTTGTACATTTCCCATAT 8369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478442812468920