Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq580 91.5 1e-13 >seq580 Length=8796 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 42902 CCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCA 42961 ||||||| | || |||||||| || | ||||||||| ||||| || || | || |||| Sbjct 7863 CCAAATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCA 7922 Query 42962 ATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG- 43020 || || ||||||||||| | ||| || ||||||| || | |||||| || || ||| Sbjct 7923 GCTGCTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTC-CTGT 7981 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080 ||| | ||||| || | | || || || ||| || || | || || || || Sbjct 7982 ATCTTGGCCTTGACGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTA 8041 Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || || || || || |||||||| Sbjct 8042 CCAGTAAGGGTCTTGACGAAGATTTGCAT 8070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381256176271374