Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq6955 150 2e-31 seq4646 98.7 1e-15 >seq6955 Length=16480 Score = 150 bits (166), Expect = 2e-31 Identities = 383/578 (66%), Gaps = 10/578 (2%) Strand=Plus/Plus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || ||| || || || ||||| ||||||||| | |||||| | || ||||| Sbjct 7804 AACAGCAGACACGCAAAGTCAGTGTGCATACCCTCATCACGACTAATGAGCTCATTGGAG 7863 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || || || || ||||| || || ||||| || | |||||| || |||||||| |||||| Sbjct 7864 AAAGTCAGACCAGGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGACGCAAACGATCCA 7923 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CA 42232 ||||||||||| || ||||| | |||||||||| || | ||| | | || | Sbjct 7924 GAAAAGAAGATGCCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCGCGAAGGTGGAGCGA 7983 Query 42233 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 42292 ||| |||||| | |||||| || ||||| ||||| || || || ||||| Sbjct 7984 TGGTCGGATATCCAACGTAAAGCCCAGTCAGCCTTGAGTTTTATGCATGGTATTGTTTCG 8043 Query 42293 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGA 42352 || |||| || || |||| | | | || || | || ||||| || | || Sbjct 8044 ATTGCATCGAAAAGGTAGTCTCTCCGGGAAGGTTCCTTGATGTAGGTATCAATGAGGAGG 8103 Query 42353 CTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCC 42412 ||| | || || || ||||| || || || ||||| ||||| || || | ||| Sbjct 8104 GAATATGTCTCAGAGTGGATGTTCTCCATCATGATTTGAAAGCCGTAAAAGCAACGTGCC 8163 Query 42413 TCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCA 42472 || | | || || ||| | ||||||| || | | || || || || || |||||| Sbjct 8164 TCTGCGGCTTGCACCTCTTTCGAAAATCGCTCGACCAGGTTCTCATTGACAATGCCGTCA 8223 Query 42473 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA---- 42528 || || ||||| || | || || || || | | ||| | ||||| Sbjct 8224 GAAGCCGCGAAAAATGCGAGGACGTGAGAGATGAAGTGATGTTCAT-TTTCGTTAAGCTT 8282 Query 42529 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGC 42588 |||||||| || | ||| || | || || | |||||| | ||||| || || || Sbjct 8283 GTTATTCCAGTCGTAGATGTCCATTTGTAAGTCCATTTCTTCAGCGGTCCAGAAAGAAGC 8342 Query 42589 TTCTGCCTTTTTATACATATTCCAGATATCATGATATT 42626 || |||||||| ||||| |||| ||||| ||| ||| Sbjct 8343 CTCAGCCTTTTTGTACAT-TTCC-CATATCTTGAAATT 8378 >seq4646 Length=10087 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/215 (71%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 72029 TCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCG 72087 ||| ||| || |||| |||||| || || || ||| ||||| | | | ||| || Sbjct 4767 TCACAAA-AGGTCAGAAATCCATAGGGCGTAGAAA-AGATCGCGTGCACGGCTCTCTTCC 4824 Query 72088 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 72147 || || |||||| ||||||||||||| | | ||| |||| |||||| ||||| | | Sbjct 4825 TTGCCGTGATTCTTGCGAAGATCGAGGAACTCAAAAATGTCAGGATGCCAAGGTTCAAGG 4884 Query 72148 TATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 72207 |||||||| | |||| || ||||| ||||| || ||||| | || | || ||| | Sbjct 4885 TATATGGCAAATGCTCCGGGACGTTTATTTCCACCTTGATCGACATAGCGCGCAGTGGCA 4944 Query 72208 TTATAAACTCTCAACATTGGAATAATACCATTGGA 72242 | ||| ||| | ||| ||||| |||||||| || Sbjct 4945 TCATATGCTCGGAGCATAGGAATGATACCATTAGA 4979 Score = 86.0 bits (94), Expect = 8e-12 Identities = 228/344 (66%), Gaps = 6/344 (2%) Strand=Plus/Plus Query 72271 CCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 72330 ||| | ||||||||||| ||| ||||| || || || ||| | || || | Sbjct 5059 CCAGTAGCACGAATATTATGAATGCTGAGACCAATACCACCGGCCGTCTTGCTAATCATG 5118 Query 72331 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 72390 ||||| | || | || || |||||||| ||||| ||| ||| ||||| || || Sbjct 5119 GCGCAGCTCTTCAGGGTGTCGTAGATGCCTTCTATGGAATCGTCCTTCATGCAAACGAGG 5178 Query 72391 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 72450 || || || | || || | || || || || |||||||| || || |||||| Sbjct 5179 AAGCAAGATGAGAGCTGAGGATGGGGTGTCCCAGCGTTGAATAAGGTCGGCGACGCGTGC 5238 Query 72451 GTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATT-- 72508 ||||| | ||||||| |||||||| ||||| | | || |||| |||| Sbjct 5239 GTAAAGTACCGCTCAGACATGAGATTGTATGTCTCGAGCACGCGGTCAATAT--CATTAC 5296 Query 72509 GATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGT-TA 72567 ||| | || || || |||||||||| |||||||||||| | ||| | | | || | Sbjct 5297 CATGAACGCCGACGGCTACACGCATTATCATATGCTGAGGACGCTCAGC-AACACGTCCA 5355 Query 72568 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 72611 || | | | ||| ||| ||||||||| ||||||||||| Sbjct 5356 TTGAGACGAAGAAGGTATGATCGTTCCAAAGTCTTAAAACCAAA 5399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670934477376280