Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq580 87.8 2e-12 >seq580 Length=8796 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| || || ||||| || |||||||| || | ||| | || || || ||| Sbjct 8096 TGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCCATCCTCCAGCTGT 8155 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || |||||| | || ||||| ||||| |||||||| |||||||||||||| ||| || Sbjct 8156 TTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATCTTG 8215 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 ||| | | || | ||||||| | || || || | || | ||||| || ||| Sbjct 8216 GCTTTCACGTTGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAGTCTTCCCCGTC 8275 Query 143162 AATGTTTTTACGAATATTTGCAT 143184 | || || ||||| |||||||| Sbjct 8276 AGGGTCTTGACGAAGATTTGCAT 8298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506859741594960