Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq6955 159 5e-34 seq6019 127 3e-24 seq4583 127 3e-24 seq4584 104 3e-17 >seq6955 Length=16480 Score = 159 bits (176), Expect = 5e-34 Identities = 384/572 (67%), Gaps = 12/572 (2%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||||||||||||||||||||| |||| || || ||||| | ||||| | || || Sbjct 8369 ATATGGGAAATGTACAAAAAGGCTGAGGCTTCTTTCTGGACCGCTGAAGAAATGGA-CTT 8311 Query 125079 TCCAA-GGACCTGTACGATTGGGAGA-CTCGTTTGACTGAAACTGAGCGAGAGTTTATAT 125136 | || |||| | ||||| ||| | | | | || || |||| ||| | | || || | Sbjct 8310 ACAAATGGACATCTACGACTGGAATAACAAGCTTAAC-GAAAATGAACATCACTTCATCT 8252 Query 125137 CGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACAC 125196 | ||| | | || || || || | || || || || ||||| || || ||| | | Sbjct 8251 CTCACGTCCTCGCATTTTTCGCGGCTTCTGACGGCATTGTCAATGAGAACCTGGTCGAGC 8192 Query 125197 GATTCTCTCAAGAGTTGACCATTC-CAGAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255 |||| || ||||| || | | | |||||| ||||||||||| || ||||||||| Sbjct 8191 GATTTTCGAAAGAGGTG-CAAGCCGCAGAGGCACGTTGCTTTTACGGCTTTCAAATCATG 8133 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315 || |||||| | ||||| || | || || || ||||| | ||||| || || Sbjct 8132 ATGGAGAACATCCACTCTGAGACATATTCCCTCCTCATTGATACCTACATCAAGGAACCT 8073 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAA---AAG 125372 || | | || || || | |||||||| || | || | ||| ||| ||| Sbjct 8072 TCCCGGAGAGACTACCTTTTCGATGCAATCGAAACAATACCATGCATA---AAACTCAAG 8016 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 ||| | |||| | || ||||| ||| | || | | ||| || | || || Sbjct 8015 GCTGACTGGGCTTTACGTTGGATATCCGACCATCGCTCCACCTTCGCGGAGCGGCTAGTT 7956 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || || || | |||||||||||||||||||| || |||||| ||||||||||| | Sbjct 7955 GCCTTTGCTTCTGTAGAGGGCATCTTCTTTTCTGGATCGTTTGCGTCCATCTTTTGGTTA 7896 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 |||||||| ||||| ||||| || ||||| | || ||| | || ||| || ||| Sbjct 7895 AAGAAGCGGGGACTGATGCCTGGTCTGACTTTCTCCAATGAGCTCATTAGTCGTGATGAG 7836 Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTT 125584 || | ||| ||||||||| ||| ||||| Sbjct 7835 GGTATGCACACTGACTTTGCGTGTCTGCTGTT 7804 >seq6019 Length=9942 Score = 127 bits (140), Expect = 3e-24 Identities = 369/559 (66%), Gaps = 12/559 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| || |||| || || ||||| | ||| ||| | || || Sbjct 1650 ATCTGGCAGATGTACAAGAAACACGAGGCGTCATTCTGGACCGCCGAGGAGATGGACTTG 1709 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||| ||| | | || ||| || | |||||| | || || || Sbjct 1710 TCTAAGGATCTCCACGACTGGAACAACCGAATGAACGACAATGAGCGTCACTTCATCTCT 1769 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 || | | || || ||||| | ||||| || ||||||||||| ||||| || || ||| Sbjct 1770 CATGTCCTCGCTTTTTTTGCTGCTTCCGACGGCATCGTCAACGAGAATCTCGTCGA-ACG 1828 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256 ||||| ||||| | || | || | ||| ||||| || || ||||| ||||||| Sbjct 1829 TTTCTCGAAAGAGGTTCAGGTTGCTGAAG-CTCGTTGCTTCTATGGCTTCCAGATCATGA 1887 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA-TCCG 125315 | ||||| | || || || | || ||| || || || | |||||| || ||| Sbjct 1888 TGGAGAATATTCATTCCGAGACCTATTCTCTCCTTATCGATACGTACATCAAAGACCCCG 1947 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTAT---ACGTAAAAAG 125372 | | | || || ||| | || |||| || | || | || ||| ||| Sbjct 1948 CCCAGAGGGAATAT-CTTTTTGATGCTGTCGAGACCATTCCTTGCATCAAACGCAAA--- 2003 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 ||| | |||| |||| |||||| || || || | | || || | || || Sbjct 2004 GCTGACTGGGCCCTTCGCTGGATCTCCGATGAACGTTCCACCTTTGCTGAGCGTCTTGTA 2063 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || ||||||||||| || ||||| ||||| || || ||||| ||||||||||| | Sbjct 2064 GCCTTCGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCTTCCATCTTTTGGTTG 2123 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 |||||||| || | ||||| || || ||| | |||||| | || || |||||| Sbjct 2124 AAGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGCCGTGACGAG 2183 Query 125553 GGCCTACACTGTGACTTTG 125571 ||| | ||| ||||||| Sbjct 2184 GGCATGCACACCGACTTTG 2202 Score = 104 bits (114), Expect = 3e-17 Identities = 120/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 125700 ATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTG 125759 ||||||||||||| |||||| |||||| | ||||| |||||||| || |||||||| || Sbjct 2379 ATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTTGCCGATCGTCTGCTT 2438 Query 125760 TACGAGTTGATTGGC--CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACC 125816 || ||||| || |||| | |||||| | | ||| ||||| || |||||| | Sbjct 2439 GTCG---CCCTTGGCAACGACAAGGTGTACAACTCAACGAACCCCTTCGACTTCATGGAC 2495 Query 125817 AGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 | || || || |||| ||||| ||||| ||||||||| Sbjct 2496 ATGATCTCGCTCCAGGGCAAGACTAACTTCTTCGAGAAG 2534 >seq4583 Length=9780 Score = 127 bits (140), Expect = 3e-24 Identities = 369/559 (66%), Gaps = 12/559 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| || |||| || || ||||| | ||| ||| | || || Sbjct 6620 ATCTGGCAGATGTACAAGAAACACGAGGCGTCATTCTGGACCGCCGAGGAGATGGACTTG 6679 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||| ||| | | || ||| || | |||||| | || || || Sbjct 6680 TCTAAGGATCTCCACGACTGGAACAACCGAATGAACGACAATGAGCGTCACTTCATCTCT 6739 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 || | | || || ||||| | ||||| || ||||||||||| ||||| || || ||| Sbjct 6740 CATGTCCTCGCTTTTTTTGCTGCTTCCGACGGCATCGTCAACGAGAATCTCGTCGA-ACG 6798 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256 ||||| ||||| | || | || | ||| ||||| || || ||||| ||||||| Sbjct 6799 TTTCTCGAAAGAGGTTCAGGTTGCTGAAG-CTCGTTGCTTCTATGGCTTCCAGATCATGA 6857 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA-TCCG 125315 | ||||| | || || || | || ||| || || || | |||||| || ||| Sbjct 6858 TGGAGAATATTCATTCCGAGACCTATTCTCTCCTTATCGATACGTACATCAAAGACCCCG 6917 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTAT---ACGTAAAAAG 125372 | | | || || ||| | || |||| || | || | || ||| ||| Sbjct 6918 CCCAGAGGGAATAT-CTTTTTGATGCTGTCGAGACCATTCCTTGCATCAAACGCAAA--- 6973 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 ||| | |||| |||| |||||| || || || | | || || | || || Sbjct 6974 GCTGACTGGGCCCTTCGCTGGATCTCCGATGAACGTTCCACCTTTGCTGAGCGTCTTGTA 7033 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || ||||||||||| || ||||| ||||| || || ||||| ||||||||||| | Sbjct 7034 GCCTTCGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCTTCCATCTTTTGGTTG 7093 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 |||||||| || | ||||| || || ||| | |||||| | || || |||||| Sbjct 7094 AAGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGCCGTGACGAG 7153 Query 125553 GGCCTACACTGTGACTTTG 125571 ||| | ||| ||||||| Sbjct 7154 GGCATGCACACCGACTTTG 7172 Score = 102 bits (112), Expect = 1e-16 Identities = 121/160 (76%), Gaps = 8/160 (5%) Strand=Plus/Plus Query 125700 ATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTAC-T 125758 ||||||||||||| |||||| |||||| | ||||| |||||||| || |||||||| | | Sbjct 7349 ATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTCGCCGATCGTCTGCTT 7408 Query 125759 GTACGAGTTGATTGGC--CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGAC 125815 ||| ||||| || |||| | |||||| | | ||| ||||| || |||||| Sbjct 7409 GTA----GCCCTTGGCAACGACAAGGTGTACAACTCAACGAACCCCTTCGACTTCATGGA 7464 Query 125816 CAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 || || || || |||| ||||| ||||| ||||||||| Sbjct 7465 CATGATCTCGCTCCAGGGCAAGACTAACTTCTTCGAGAAG 7504 >seq4584 Length=6343 Score = 104 bits (114), Expect = 3e-17 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 125700 ATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTG 125759 ||||||||||||| |||||| |||||| | ||||| |||||||| || ||||| || || Sbjct 3911 ATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTTGCTGATCGCCTGCT- 3969 Query 125760 TACGAGTTGATTGGC---CGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACC 125816 || | ||||| |||| | |||||| ||| |||||||| || |||||| | Sbjct 3970 --CGTGGCCCTTGGCAATGACAAGGTGTACAACTCCACAAATCCCTTCGACTTCATGGAC 4027 Query 125817 AGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 | || || || |||| ||||| ||||| ||||||||| Sbjct 4028 ATGATCTCGCTTCAGGGCAAGACTAACTTCTTCGAGAAG 4066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740833149154280