Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq4584 122 7e-23 seq6019 100 2e-16 seq4583 100 2e-16 >seq4584 Length=6343 Score = 122 bits (134), Expect = 7e-23 Identities = 297/450 (66%), Gaps = 0/450 (0%) Strand=Plus/Minus Query 13132 TAGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAG 13191 |||||| | || | | |||| |||| || ||||| || ||||| | || || || Sbjct 3757 TAGATGGCTGAAGAGAAGACATCCAAAGTCGGTGTGCATGCCCTCATCACGGCTGATGAG 3698 Query 13192 CTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGC 13251 ||||||||| || || ||||| ||||| | || || || || | |||||| || | ||| Sbjct 3697 CTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGC 3638 Query 13252 AAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATA 13311 ||| || || || || || || |||||||| || ||||| |||| | | || || | Sbjct 3637 AAAAGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCAAAGGCTACGAGACGCTCGGCAAA 3578 Query 13312 CGTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTT 13371 || | || | ||||| | |||||||| ||||| |||| | ||| Sbjct 3577 GGTGGAACGTTCATCGGAGATCCAGTGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGG 3518 Query 13372 CATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATC 13431 || | || || || | ||| | ||| | | | |||| || || || || Sbjct 3517 AATGGTCTCGATGGCATCAAAAAGATATTCCCTCTGGGCGGGGTCTTTGATGTATGTGTC 3458 Query 13432 TATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAA 13491 || | | ||| | || ||||||||||| |||||| || ||||||||||| || Sbjct 3457 GATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCCATCATGATCTGGAAACCATAGAA 3398 Query 13492 ACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAAC 13551 || | ||| || | ||||||||||| | || | ||| | | ||| |||||||| Sbjct 3397 GCAACGAGCTTCAGCAACCTGAACTTCTTTCGAGAAACGTTCGACGAGGTTCTCGTTAAC 3338 Query 13552 TATCCCGTCACTAGCAGCaaaaaaaGCAAG 13581 || |||||| |||||||||||| || || Sbjct 3337 GATGCCGTCAGAAGCAGCAAAAAAGGCGAG 3308 >seq6019 Length=9942 Score = 100 bits (110), Expect = 2e-16 Identities = 292/450 (65%), Gaps = 0/450 (0%) Strand=Plus/Minus Query 13132 TAGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAG 13191 |||||| | || | | |||| |||| || ||||| || || || | || || || Sbjct 2225 TAGATGGCTGAAGAGAAGACATCCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAG 2166 Query 13192 CTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGC 13251 ||||||||| || || ||||| ||||| | || || || || | |||||| || | ||| Sbjct 2165 CTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGC 2106 Query 13252 AAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATA 13311 |||||| || || || || || |||||||| || || || |||| | | ||| || | Sbjct 2105 AAACGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCGAAGGCTACAAGACGCTCAGCAAA 2046 Query 13312 CGTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTT 13371 || | || | ||||| |||||||| ||||| |||| | ||| Sbjct 2045 GGTGGAACGTTCATCGGAGATCCAGCGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGG 1986 Query 13372 CATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATC 13431 || | || | || | ||| | ||| | | | |||| || || ||||| Sbjct 1985 AATGGTCTCGACAGCATCAAAAAGATATTCCCTCTGGGCGGGGTCTTTGATGTACGTATC 1926 Query 13432 TATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAA 13491 || | | ||| | || ||||||||||| |||||| || ||||| ||||| || Sbjct 1925 GATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCCATCATGATCTGGAAGCCATAGAA 1866 Query 13492 ACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAAC 13551 || | ||| || | |||||||| || | || | ||| | | || ||||| || Sbjct 1865 GCAACGAGCTTCAGCAACCTGAACCTCTTTCGAGAAACGTTCGACGAGATTCTCGTTGAC 1806 Query 13552 TATCCCGTCACTAGCAGCaaaaaaaGCAAG 13581 || ||||| ||||||||||||||| || Sbjct 1805 GATGCCGTCGGAAGCAGCAAAAAAAGCGAG 1776 >seq4583 Length=9780 Score = 100 bits (110), Expect = 2e-16 Identities = 292/450 (65%), Gaps = 0/450 (0%) Strand=Plus/Minus Query 13132 TAGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAG 13191 |||||| | || | | |||| |||| || ||||| || || || | || || || Sbjct 7195 TAGATGGCTGAAGAGAAGACATCCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAG 7136 Query 13192 CTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGC 13251 ||||||||| || || ||||| ||||| | || || || || | |||||| || | ||| Sbjct 7135 CTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGC 7076 Query 13252 AAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATA 13311 |||||| || || || || || |||||||| || || || |||| | | ||| || | Sbjct 7075 AAACGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCGAAGGCTACAAGACGCTCAGCAAA 7016 Query 13312 CGTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTT 13371 || | || | ||||| |||||||| ||||| |||| | ||| Sbjct 7015 GGTGGAACGTTCATCGGAGATCCAGCGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGG 6956 Query 13372 CATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATC 13431 || | || | || | ||| | ||| | | | |||| || || ||||| Sbjct 6955 AATGGTCTCGACAGCATCAAAAAGATATTCCCTCTGGGCGGGGTCTTTGATGTACGTATC 6896 Query 13432 TATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAA 13491 || | | ||| | || ||||||||||| |||||| || ||||| ||||| || Sbjct 6895 GATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCCATCATGATCTGGAAGCCATAGAA 6836 Query 13492 ACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAAC 13551 || | ||| || | |||||||| || | || | ||| | | || ||||| || Sbjct 6835 GCAACGAGCTTCAGCAACCTGAACCTCTTTCGAGAAACGTTCGACGAGATTCTCGTTGAC 6776 Query 13552 TATCCCGTCACTAGCAGCaaaaaaaGCAAG 13581 || ||||| ||||||||||||||| || Sbjct 6775 GATGCCGTCGGAAGCAGCAAAAAAAGCGAG 6746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430854220851006