Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq580 150 4e-31 seq582 140 7e-28 seq4584 123 6e-23 seq6019 109 1e-18 seq4583 109 1e-18 seq6955 89.7 1e-12 >seq580 Length=8796 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || ||||||||||| || |||||||| || |||| || || Sbjct 8086 AAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCCATC 8145 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || ||||| ||||||||||| || | ||| || || ||||| || |||||||| || Sbjct 8146 CTCCAGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTC 8205 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| ||||| || || || | ||| || | || ||||| ||||||||||| Sbjct 8206 CTGAATCTTGGCTTTCACGTTGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAGT 8265 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || || || || || || ||||| Sbjct 8266 CTTCCCCGTCAGGGTCTTGACGAAGATTTGCAT 8298 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| ||||| || || || | || | || ||||| || || || || |||||| Sbjct 7880 TCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCAGCTGCTTCCCGGCAAAA 7939 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | || ||||| ||||| || ||||| || ||||| ||||| || || || || Sbjct 7940 ATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTATCTTGGCCTTGACGTTG 7999 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | |||||| || || ||||| || || || |||||||||||||| || || || Sbjct 8000 TCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTACCAGTAAGGGTCTTGACG 8059 Query 104549 AATATCTGCAT 104559 || || ||||| Sbjct 8060 AAGATTTGCAT 8070 >seq582 Length=4044 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || ||||||||||| ||||||||||| || || | ||| ||| Sbjct 3312 AGAACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGAGAGCGTGCGACCATCT 3371 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || |||||||| || || | || ||||| || || || ||||| || || Sbjct 3372 TCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGGGATCCCTTCCTTGTCT 3431 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || || || || | || ||| | || ||||||| ||||||||| Sbjct 3432 TGAATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAACCTCTAACGTAATAGTC 3491 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| | || || ||||| |||||||| Sbjct 3492 TTCCCAGTCAACGTCTTGACAAAAATCTGCAT 3523 Score = 118 bits (130), Expect = 2e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || ||||| || | ||| || || || || || ||||| ||| Sbjct 3605 GTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGCTGTTTCCCA 3664 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || ||||| || || || |||||||||||||| || || Sbjct 3665 GCGAAGATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTTCGCCTTG 3724 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || | || ||||| || ||||| || || || || | || Sbjct 3725 ACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCGGTCAACGTC 3784 Query 104543 TTTACAAATATCTGCATT 104560 || || |||||||||||| Sbjct 3785 TTGACGAATATCTGCATT 3802 >seq4584 Length=6343 Score = 123 bits (136), Expect = 6e-23 Identities = 296/442 (67%), Gaps = 7/442 (2%) Strand=Plus/Plus Query 268841 TTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTA 268900 ||||| ||| || |||| || |||||||| | | ||| || ||||||||||| || || Sbjct 3293 TTTATCTCTCATGTTCTCGCCTTTTTTGCTGCTTCTGACGGCATCGTTAACGAGAACCTC 3352 Query 268901 GTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAG 268960 || || |||| |||| || ||| || ||||||| | || || || || |||||| Sbjct 3353 GTCGAACGTTTCTCGAAAGAAGTTCAGGTTGCTGAAGCTCGTTGCTTCTATGGTTTCCAG 3412 Query 268961 ATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGAT 269020 || || || ||||||||||| |||| || ||| | || || || || || | Sbjct 3413 ATCATGATGGAGAATATTCATTCCGAGACCTATTCTCTCCTTATCGACACATACATCAAA 3472 Query 269021 GATAACAACGAAAAGAAAAGACTATTTTCTTCTAT-GAGAACTATGGACTGTGTGAGaaa 269079 || | | | | | || || ||| | | || |||| | || || | | | Sbjct 3473 GACCCCGCCCAGAGGGAATATCTTTTTGATGCCATCGAGACC-ATTCCTTGCATCAAACG 3531 Query 269080 aaaaTCTGAATGGGCTCTGAAATGGATAAACGAT-AGCG---CGCCTTACGGAGAAAGGT 269135 ||| |||| ||||| || | ||||| |||| | || | |||| | || | Sbjct 3532 CAAAGCTGACTGGGCCCTTCACTGGATCTCCGATGAACGTTCCACCTTT-GCCGAGCGTC 3590 Query 269136 TAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTT 269195 | || || |||||||| || ||||| || ||||| || || |||||||| | ||||||| Sbjct 3591 TCGTAGCCTTTGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCTTTTGCTTCCATCTTTT 3650 Query 269196 GGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGG 269255 |||||||||| | ||| | ||||| || | || ||||| ||||| | || ||| | | Sbjct 3651 GGTTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGCCGTG 3710 Query 269256 ACGAAGGTTTACACTGCGACTT 269277 | || || | ||| |||||| Sbjct 3711 ATGAGGGCATGCACACCGACTT 3732 >seq6019 Length=9942 Score = 109 bits (120), Expect = 1e-18 Identities = 293/442 (66%), Gaps = 7/442 (2%) Strand=Plus/Plus Query 268841 TTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTA 268900 || || ||| || | || || |||||||| | | || || ||||| ||||| ||||| Sbjct 1761 TTCATCTCTCATGTCCTCGCTTTTTTTGCTGCTTCCGACGGCATCGTCAACGAGAATCTC 1820 Query 268901 GTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAG 268960 || || |||| ||||||| ||| || ||||||| | || || || || |||||| Sbjct 1821 GTCGAACGTTTCTCGAAAGAGGTTCAGGTTGCTGAAGCTCGTTGCTTCTATGGCTTCCAG 1880 Query 268961 ATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGAT 269020 || || || ||||||||||| |||| || ||| | || ||||| || || | Sbjct 1881 ATCATGATGGAGAATATTCATTCCGAGACCTATTCTCTCCTTATCGATACGTACATCAAA 1940 Query 269021 GATAACAACGAAAAGAAAAGACTATTTTCTTCTAT-GAGAACTATGGACTGTGTGAGaaa 269079 || | | | | | || || ||| | || | |||| | || || | | | Sbjct 1941 GACCCCGCCCAGAGGGAATATCTTTTTGATGCTGTCGAGACC-ATTCCTTGCATCAAACG 1999 Query 269080 aaaaTCTGAATGGGCTCTGAAATGGATAAACGAT-AGCG---CGCCTTACGGAGAAAGGT 269135 ||| |||| ||||| || ||||| |||| | || | |||| | || | Sbjct 2000 CAAAGCTGACTGGGCCCTTCGCTGGATCTCCGATGAACGTTCCACCTTT-GCTGAGCGTC 2058 Query 269136 TAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTT 269195 | || || || ||||| || ||||| || ||||| || || || ||||| | ||||||| Sbjct 2059 TTGTAGCCTTCGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCTTCCATCTTTT 2118 Query 269196 GGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGG 269255 |||||||||| | ||| | ||||| || | || ||||| ||||| | || ||| | | Sbjct 2119 GGTTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGCCGTG 2178 Query 269256 ACGAAGGTTTACACTGCGACTT 269277 |||| || | ||| |||||| Sbjct 2179 ACGAGGGCATGCACACCGACTT 2200 >seq4583 Length=9780 Score = 109 bits (120), Expect = 1e-18 Identities = 293/442 (66%), Gaps = 7/442 (2%) Strand=Plus/Plus Query 268841 TTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTA 268900 || || ||| || | || || |||||||| | | || || ||||| ||||| ||||| Sbjct 6731 TTCATCTCTCATGTCCTCGCTTTTTTTGCTGCTTCCGACGGCATCGTCAACGAGAATCTC 6790 Query 268901 GTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAG 268960 || || |||| ||||||| ||| || ||||||| | || || || || |||||| Sbjct 6791 GTCGAACGTTTCTCGAAAGAGGTTCAGGTTGCTGAAGCTCGTTGCTTCTATGGCTTCCAG 6850 Query 268961 ATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGAT 269020 || || || ||||||||||| |||| || ||| | || ||||| || || | Sbjct 6851 ATCATGATGGAGAATATTCATTCCGAGACCTATTCTCTCCTTATCGATACGTACATCAAA 6910 Query 269021 GATAACAACGAAAAGAAAAGACTATTTTCTTCTAT-GAGAACTATGGACTGTGTGAGaaa 269079 || | | | | | || || ||| | || | |||| | || || | | | Sbjct 6911 GACCCCGCCCAGAGGGAATATCTTTTTGATGCTGTCGAGACC-ATTCCTTGCATCAAACG 6969 Query 269080 aaaaTCTGAATGGGCTCTGAAATGGATAAACGAT-AGCG---CGCCTTACGGAGAAAGGT 269135 ||| |||| ||||| || ||||| |||| | || | |||| | || | Sbjct 6970 CAAAGCTGACTGGGCCCTTCGCTGGATCTCCGATGAACGTTCCACCTTT-GCTGAGCGTC 7028 Query 269136 TAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTT 269195 | || || || ||||| || ||||| || ||||| || || || ||||| | ||||||| Sbjct 7029 TTGTAGCCTTCGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCTTCCATCTTTT 7088 Query 269196 GGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGG 269255 |||||||||| | ||| | ||||| || | || ||||| ||||| | || ||| | | Sbjct 7089 GGTTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGCCGTG 7148 Query 269256 ACGAAGGTTTACACTGCGACTT 269277 |||| || | ||| |||||| Sbjct 7149 ACGAGGGCATGCACACCGACTT 7170 >seq6955 Length=16480 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 269133 GGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCT 269192 || ||||||| ||||| ||||||| || || |||||||| || || ||||| | |||| Sbjct 7963 GGCTAGTTGCCTTTGCTTCTGTAGAGGGCATCTTCTTTTCTGGATCGTTTGCGTCCATCT 7904 Query 269193 TTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCA 269252 ||||||| ||||| | || || ||||| || | |||||||| || || | || || Sbjct 7903 TTTGGTTAAAGAAGCGGGGACTGATGCCTGGTCTGACTTTCTCCAATGAGCTCATTAGTC 7844 Query 269253 GGGACGAAGGTTTACACTGCGACTTCGCTTGT 269284 | || || ||| | ||| ||||| || ||| Sbjct 7843 GTGATGAGGGTATGCACACTGACTTTGCGTGT 7812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151038399818324