Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq13240 93.3 2e-14 seq13239 89.7 3e-13 seq2074 87.8 9e-13 seq11386 84.2 1e-11 >seq13240 Length=1655 Score = 93.3 bits (102), Expect = 2e-14 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 ||||| || ||||| | | |||||||||| ||||||||||||||||||||||||| Sbjct 844 AAAATTAAGATGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGC 903 Query 11506 TCTRACCAACTGAGCTAATGGGCCG 11530 ||| ||||||||||||| | ||||| Sbjct 904 TCTAACCAACTGAGCTAGTCGGCCG 928 >seq13239 Length=1109 Score = 89.7 bits (98), Expect = 3e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || Sbjct 773 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 832 Query 11528 CCG 11530 ||| Sbjct 833 CCG 835 >seq2074 Length=15334 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || Sbjct 15162 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 15103 Query 11528 CC 11529 || Sbjct 15102 CC 15101 >seq11386 Length=400 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 345 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTA 399 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261413429493628