Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq582 122 8e-23 seq580 102 7e-17 >seq582 Length=4044 Score = 122 bits (134), Expect = 8e-23 Identities = 148/200 (74%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTT 94867 |||||| ||||| || | |||||||| | | || || || ||||||||| || ||| Sbjct 3098 AGTAGACTCCTTCTGGATATTATAATC--TGAAAGAGTACGACCATCCTCCAGTTGCTTT 3155 Query 94868 CCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCC 94927 ||| | ||||| | | |||||| || || || ||||| || ||||| | || || ||| Sbjct 3156 CCGGCGAAGATCAGACGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCGCC 3215 Query 94928 TTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGA 94987 |||||| | | | |||||||| | ||||| || | ||| ||||| || || || || Sbjct 3216 TTGACGTTGTCAATAGTGTCAGAGGACTCGACTTCCAACGTAATGGTCTTGCCCGTCAGC 3275 Query 94988 GTTTTCACAAAGATCTGCAT 95007 || ||||||||||||||||| Sbjct 3276 GTCTTCACAAAGATCTGCAT 3295 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 94802 AAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGC 94861 ||||| | ||| || ||||| || | ||| || ||| || ||| || |||||| ||| Sbjct 3596 AAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGC 3655 Query 94862 TGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATT 94921 ||||| || | ||||| | | ||||| |||||||||||||| || || || | ||| Sbjct 3656 TGTTTCCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATC 3715 Query 94922 TTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCA 94981 || |||||||| | | | ||||||| ||||| |||| || ||||||||||| Sbjct 3716 TTCGCCTTGACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCG 3775 Query 94982 GTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || || || |||||||| Sbjct 3776 GTCAACGTCTTGACGAATATCTGCAT 3801 Score = 86.0 bits (94), Expect = 6e-12 Identities = 111/152 (73%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 94799 ACCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||| || | || || ||||| || | |||||||||| || ||| | ||| || Sbjct 3871 ACCAAGATGGAGGGTTGACTCCTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCTTC 3930 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||||||| ||| ||||||| || | || || || || ||||| || || ||||| | Sbjct 3931 CAGCTGTTTCCCGGCAAAGATCAAGCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCTTG 3990 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAG 94949 || || |||||||| | ||| |||||||| Sbjct 3991 GATCTTGGCCTTGACATTGTCGATAGTGTCAG 4022 >seq580 Length=8796 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||||||| || ||| |||| || | || ||||||||| |||||||||||||| || Sbjct 7915 ATCTTCCAGCTGCTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTT 7974 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || ||||||||| | ||| || || | || || || | ||||| Sbjct 7975 GTCCTGTATCTTGGCCTTGACGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGAT 8034 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || |||||||| || || || ||||| ||||| Sbjct 8035 CGTCTTACCAGTAAGGGTCTTGACGAAGATTTGCAT 8070 Score = 82.4 bits (90), Expect = 7e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||||||||||||||| || |||| || | | ||||| || |||||||| |||||||| Sbjct 8143 ATCCTCCAGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTT 8202 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||| || || || ||| | | | ||||| | ||||| || | || || Sbjct 8203 GTCCTGAATCTTGGCTTTCACGTTGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAAT 8262 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || || || || || ||||| ||||||| Sbjct 8263 AGTCTTCCCCGTCAGGGTCTTGACGAAGATTTGCATGC 8300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448154454373080