Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1442 98.7 2e-16 seq5650 96.9 5e-16 seq11595 95.1 2e-15 seq7845 95.1 2e-15 seq6291 95.1 2e-15 >seq1442 Length=108374 Score = 98.7 bits (108), Expect = 2e-16 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 ||||| |||||||| || || |||||||||||||||||| | || || | |||| ||| Sbjct 85331 GCTATTCGTCGTCTTGCACGCCGTGGTGGAGTCAAGCGTATTTCCGGCCTCATCTACGAA 85272 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606 || | ||| | ||| | ||||||||||| ||| |||||| ||| || || |||| Sbjct 85271 GAAACTCGCGGTGTCCTCAAGATCTTCCTGGAGAATGTTATCAGGGATTCTGTCACCTAT 85212 Query 16607 ACCGAGCACGCTAAACG 16623 || ||||| || ||||| Sbjct 85211 ACTGAGCATGCCAAACG 85195 >seq5650 Length=14603 Score = 96.9 bits (106), Expect = 5e-16 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 16468 CCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGT 16527 || ||| ||||| ||||| ||||| |||||||| ||||||||||| || || |||||| | Sbjct 925 CCCAGGTATCACAAAGCCTGCTATTCGTCGTCTTGCTCGTCGTGGGGGTGTGAAGCGTAT 984 Query 16528 CTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 ||||| | | ||||| |||| |||| ||||||||| || ||||| Sbjct 985 TTCTGGTCTCATTTATGAGGAGACCCGTGGTGTTTTGAAAATTTTCCT 1032 Score = 96.9 bits (106), Expect = 5e-16 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 16468 CCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGT 16527 || ||| ||||| ||||| ||||| |||||||| ||||||||||| || || |||||| | Sbjct 13698 CCCAGGTATCACAAAGCCTGCTATTCGTCGTCTTGCTCGTCGTGGGGGTGTGAAGCGTAT 13639 Query 16528 CTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 ||||| | | ||||| |||| |||| ||||||||| || ||||| Sbjct 13638 TTCTGGTCTCATTTATGAGGAGACCCGTGGTGTTTTGAAAATTTTCCT 13591 >seq11595 Length=4456 Score = 95.1 bits (104), Expect = 2e-15 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| |||||||| || ||||| || ||||| ||||| |||||||| || |||||| |||| Sbjct 2299 AGGTATCACCAAACCCGCTATTCGCCGTCTCGCTCGCCGTGGTGGCGTGAAGCGTATCTC 2358 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 || | ||||||| |||| |||| ||| ||||||||||| | ||| ||| || | Sbjct 2359 GGGGCTTATCTATGAGGAGACCCGTGGTGTGTTGAAGATCTTTTTGGAGAACGTCATTCG 2418 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAA 16620 || || || || || ||||| || || Sbjct 2419 GGACTCTGTCACGTACACTGAGCATGCCAA 2448 >seq7845 Length=2047 Score = 95.1 bits (104), Expect = 2e-15 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| |||||||| || |||||||| ||||| ||||| |||||||| || |||||| |||| Sbjct 1955 AGGTATCACCAAACCCGCTATCCGCCGTCTCGCTCGCCGTGGTGGCGTGAAGCGTATCTC 1896 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || | ||||||| |||| || | ||| ||||||||||| Sbjct 1895 GGGGCTTATCTATGAGGAGACCCGGGGTGTGTTGAAGATCTT 1854 >seq6291 Length=2170 Score = 95.1 bits (104), Expect = 2e-15 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| |||||||| || |||||||| ||||| ||||| |||||||| || |||||| |||| Sbjct 1217 AGGTATCACCAAACCCGCTATCCGCCGTCTCGCTCGCCGTGGTGGCGTGAAGCGTATCTC 1158 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || | ||||||| |||| || | ||| ||||||||||| Sbjct 1157 GGGGCTTATCTATGAGGAGACCCGGGGTGTGTTGAAGATCTT 1116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79052888166279