Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq4584 98.7 1e-15 seq582 89.7 5e-13 seq6019 87.8 2e-12 seq4583 84.2 2e-11 >seq4584 Length=6343 Score = 98.7 bits (108), Expect = 1e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 119654 CACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAA 119713 |||||| || || || || ||||||||||||| ||| || || | | ||| || ||||| Sbjct 4072 CACACGCTTCTCGAAGAAGTTAGTCTTGCCCTGAAGCGAGATCATGTCCATGAAGTCGAA 4013 Query 119714 AGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCAC 119773 ||||||| | |||| | |||||| | ||| | | | | ||| ||||| || || Sbjct 4012 GGGATTTGTGGAGTTGTACACCTTGTCATTGCCAAGGGCCACGAGCAGGCGATCAGCAAC 3953 Query 119774 AAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAGCGACCGGTAAAG 119832 |||||| ||||||| ||||||| | ||| || |||||||| | | || ||| || | | Sbjct 3952 AAACTCAATGTATTGGCACATGAGCTTG-GAGTTCATGCCAATGAGAGAGACAGGGAGGG 3894 Query 119833 CAT 119835 ||| Sbjct 3893 CAT 3891 >seq582 Length=4044 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || || ||||| || | || || | || | || || | Sbjct 3523 ATGCAGATTTTTGTCAAGACGTTGACTGGGAAGACTATTACGTTAGAGGTTGAGTCCTCC 3464 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || || |||||| ||||| |||||||| || || ||||| Sbjct 3463 GACACTATTGATAACGTGAAGGCGAAGATTCAAGACAAGGAAGGGATCCCGCCGGATCAG 3404 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | | ||||| || |||||||||| | | | || ||||||||| Sbjct 3403 CAACGTCTCATCTTTGCTGGCAAGCAGCTCGAAGATGGTCGCACGCTCTCTGACTATAAC 3344 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| ||||| || || | |||||||| || Sbjct 3343 ATTCAGAAAGAGTCGACGCTGCATCTGGTTCT 3312 >seq6019 Length=9942 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 119654 CACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAA 119713 ||| || || || || || ||||||||||||| || || || | | ||| || ||||| Sbjct 2540 CACGCGCTTCTCGAAGAAGTTAGTCTTGCCCTGGAGCGAGATCATGTCCATGAAGTCGAA 2481 Query 119714 AGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCAC 119773 || || | | |||| | |||||||| ||| | ||| | ||| ||||| || || Sbjct 2480 GGGGTTCGTTGAGTTGTACACCTTGTCGTTGCCAAGGGCGACAAGCAGACGATCGGCAAC 2421 Query 119774 AAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCC 119812 |||||| ||||||| ||||||| | ||| || |||||||| Sbjct 2420 AAACTCAATGTATTGGCACATGAGCTTG-GAGTTCATGCC 2382 >seq4583 Length=9780 Score = 84.2 bits (92), Expect = 2e-11 Identities = 116/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 119654 CACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAA 119713 ||| || || || || || ||||||||||||| || || || | | ||| || ||||| Sbjct 7510 CACGCGCTTCTCGAAGAAGTTAGTCTTGCCCTGGAGCGAGATCATGTCCATGAAGTCGAA 7451 Query 119714 AGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCAC 119773 || || | | |||| | |||||||| ||| | | | | ||| ||||| || || Sbjct 7450 GGGGTTCGTTGAGTTGTACACCTTGTCGTTGCCAAGGGCTACAAGCAGACGATCGGCGAC 7391 Query 119774 AAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCC 119812 |||||| ||||||| ||||||| | ||| || |||||||| Sbjct 7390 AAACTCAATGTATTGGCACATGAGCTTG-GAGTTCATGCC 7352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478516390018160