Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq6955 122 2e-22 seq4646 122 2e-22 seq4584 120 8e-22 seq6019 111 4e-19 seq4583 111 4e-19 >seq6955 Length=16480 Score = 122 bits (134), Expect = 2e-22 Identities = 127/167 (76%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 22483 TTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTT 22542 |||||||| || || |||| |||||| || || ||||| |||||||||||| | ||| Sbjct 7973 TTCGCGGAGCGGCTAGTTGCCTTTGCTTCTGTAGAGGGCATCTTCTTTTCTGGATCGTTT 7914 Query 22543 TGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAG 22602 | ||||||||| |||| || || | | | ||||| ||||| || || || |||||| Sbjct 7913 GCGTCCATCTTTTGGTTAAAGAAGCGGGGACTGATGCCTGGTCTGACTTTCTCCAATGAG 7854 Query 22603 TTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCT 22649 | ||||| || ||||||||| | || || || ||||||||| |||| Sbjct 7853 CTCATTAGTCGTGATGAGGGTATGCACACTGACTTTGCGTGTCTGCT 7807 >seq4646 Length=10087 Score = 122 bits (134), Expect = 2e-22 Identities = 230/336 (68%), Gaps = 2/336 (1%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 || || | |||||| |||| ||| ||||| |||| ||||||| | ||| ||| Sbjct 5399 TTTGGTTTTAAGACTTTGGAACGATCATACCTTCTTCGTCTCAATGGACGTGTTGCTGAG 5340 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 || || ||||||||| |||||||||| || | || | ||| | ||| |||| | Sbjct 5339 CGTCCTCAGCATATGATAATGCGTGTAGCCGTCGGCGTTCATGGTAATGATATTGACCGC 5280 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-TTCACGCACGCCACGCCAACAAT 363569 | | | || ||||| || || | || || ||| || |||||||| |||| || | Sbjct 5279 GTGCTCGAGACATACAATCTCATGTCTGAGCG-GTACTTTACGCACGCGTCGCCGACCTT 5221 Query 363570 GTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGA 363629 | ||| ||||| || | |||| ||| | || |||||||| || | |||||||| Sbjct 5220 ATTCAACGCTGGGACACCCCATCCTCAGCTCTCATCTTGCTTCCTCGTTTGCATGAAGGA 5161 Query 363630 CGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGC 363689 ||||||||| || || |||| ||||| || |||| || || | ||| ||||| || Sbjct 5160 CGATTCCATAGAAGGCATCTACGACACCCTGAAGAGCTGCGCCATGATTAGCAAGACGGC 5101 Query 363690 AGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 || || |||||| | || || ||| ||||||| Sbjct 5100 CGGTGGTATTGGTCTCAGCATTCATAATATTCGTGC 5065 Score = 95.1 bits (104), Expect = 3e-14 Identities = 156/221 (71%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 || ||||| ||||| | |||| ||||| || | | ||| |||||| | || ||| Sbjct 4985 GGGTACTCTAATGGTATCATTCCTATGCTCCGAGCATATGATGCCACTGCGCGCTATGTC 4926 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 || || |||||| || || || || ||||| || || || || ||| ||| | Sbjct 4925 GATCAAGGTGGAAATAAACGTCCCGGAGCATTTGCCATATACCTTGAACCTTGGCATCCT 4866 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAAAAGAGGAATTGCGTGCACG 363932 || ||||||||||| || || || || || || ||| || || || || |||||||| Sbjct 4865 GACATTTTTGAGTTCCTCGATCTTCGCAAGAATCAC-GGCAAGGAAGAGAGCCGTGCACG 4807 Query 363933 TGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973 ||||| ||||| || || ||| ||||||||| |||| ||| Sbjct 4806 CGATCTTTTCTACGCCCTATGGATTTCTGACC-TTTTGTGA 4767 >seq4584 Length=6343 Score = 120 bits (132), Expect = 8e-22 Identities = 148/202 (73%), Gaps = 3/202 (1%) Strand=Plus/Plus Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTTCA---TTCGCGGAACGTCTT 22497 || || || ||||| || | ||||| | |||||||||| || || || ||||| Sbjct 3533 AAAGCTGACTGGGCCCTTCACTGGATCTCCGATGAACGTTCCACCTTTGCCGAGCGTCTC 3592 Query 22498 ATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGG 22557 | || ||||| | ||||||||||||||||| ||||| | ||| | | ||||||||| Sbjct 3593 GTAGCCTTTGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCTTTTGCTTCCATCTTTTGG 3652 Query 22558 CTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGAT 22617 | || || |||| | ||||| ||||| ||||| ||||| ||| | || ||||| ||| Sbjct 3653 TTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGCCGTGAT 3712 Query 22618 GAGGGTCTTCATACCGATTTTG 22639 ||||| | || ||||| |||| Sbjct 3713 GAGGGCATGCACACCGACTTTG 3734 >seq6019 Length=9942 Score = 111 bits (122), Expect = 4e-19 Identities = 146/202 (72%), Gaps = 3/202 (1%) Strand=Plus/Plus Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTTCA---TTCGCGGAACGTCTT 22497 || || || ||||| || ||||| | |||||||||| || || || |||||| Sbjct 2001 AAAGCTGACTGGGCCCTTCGCTGGATCTCCGATGAACGTTCCACCTTTGCTGAGCGTCTT 2060 Query 22498 ATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGG 22557 | || || || | ||||||||||||||||| ||||| | ||| | | ||||||||| Sbjct 2061 GTAGCCTTCGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCTTCCATCTTTTGG 2120 Query 22558 CTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGAT 22617 | || || |||| | ||||| ||||| ||||| ||||| ||| | || ||||| || Sbjct 2121 TTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGCCGTGAC 2180 Query 22618 GAGGGTCTTCATACCGATTTTG 22639 ||||| | || ||||| |||| Sbjct 2181 GAGGGCATGCACACCGACTTTG 2202 >seq4583 Length=9780 Score = 111 bits (122), Expect = 4e-19 Identities = 146/202 (72%), Gaps = 3/202 (1%) Strand=Plus/Plus Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTTCA---TTCGCGGAACGTCTT 22497 || || || ||||| || ||||| | |||||||||| || || || |||||| Sbjct 6971 AAAGCTGACTGGGCCCTTCGCTGGATCTCCGATGAACGTTCCACCTTTGCTGAGCGTCTT 7030 Query 22498 ATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGG 22557 | || || || | ||||||||||||||||| ||||| | ||| | | ||||||||| Sbjct 7031 GTAGCCTTCGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCTTCCATCTTTTGG 7090 Query 22558 CTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGAT 22617 | || || |||| | ||||| ||||| ||||| ||||| ||| | || ||||| || Sbjct 7091 TTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGCCGTGAC 7150 Query 22618 GAGGGTCTTCATACCGATTTTG 22639 ||||| | || ||||| |||| Sbjct 7151 GAGGGCATGCACACCGACTTTG 7172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302946088983146