Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq580 87.8 2e-12 >seq580 Length=8796 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | || || || | ||||| | || |||||| | Sbjct 8298 ATGCAAATCTTCGTCAAGACCCTGACGGGGAAGACTATTACACTGGAGGTCGAGTCATCG 8239 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || ||| |||||| |||||||||||||| |||||||| || Sbjct 8238 GACACCATTGACAACGTGAAAGCCAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCAG 8179 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || |||| | ||||| || || || |||| | ||| || || || ||| Sbjct 8178 CAGCGTCTCATTTTTGCTGGCAAACAGCTGGAGGATGGCCGAACACTCTCTGACTACAAC 8119 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 ||||| ||||| || || |||| Sbjct 8118 ATTCAGAAAGAGTCCACCCTTCA 8096 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | ||||| || |||| ||| |||| || ||| | Sbjct 8070 ATGCAAATCTTCGTCAAGACCCTTACTGGTAAGACGATCACCCTCGAGGTGGAGTCTTCG 8011 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || |||||||| | ||||| ||||| ||||| ||||| || ||||||||||| Sbjct 8010 GATACCATCGACAACGTCAAGGCCAAGATACAGGACAAGGAAGGTATTCCTCCCGATCAG 7951 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || |||| |||| | ||| ||||| || ||||||| | | |||| | ||||| || Sbjct 7950 CAACGACTTATTTTTGCCGGGAAGCAGCTGGAAGATGGCCG-CACGTTGTCGGATTACAA 7892 Query 24170 CATTCAAAAAGAATCTACAATTCATTT 24196 || || || || ||| ||||||| Sbjct 7891 TATCCAGAAGGAGAGTACCCTTCATTT 7865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429808132062465