Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq582 109 5e-19 seq2531 98.7 9e-16 seq6955 86.0 6e-12 seq583 86.0 6e-12 seq580 86.0 6e-12 seq4313 82.4 7e-11 >seq582 Length=4044 Score = 109 bits (120), Expect = 5e-19 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 131027 CTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGC-GCGAGTCCTCT 131085 |||| || | || |||||||| ||||||||||| ||| || || | || | ||||| Sbjct 3594 CTAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCA-TCCTCA 3652 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 ||||| || || ||| |||| | |||||||||||| ||||| || || || || || Sbjct 3653 AGCTGTTTCCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGA 3712 Query 131146 ATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTA 131205 || ||| ||||| | || | || || | ||||||| || | ||||| |||||| Sbjct 3713 ATCTTCGCCTTGACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTT 3772 Query 131206 CCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| | || || ||||| |||||||| Sbjct 3773 CCGGTCAACGTCTTGACGAATATCTGCAT 3801 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | ||| | |||||||| || |||||||| || || Sbjct 3297 CCACCGCGAAGACGGAGAACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGAG 3356 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||||||||| || |||| | ||| ||||| ||||| ||| Sbjct 3357 AGCGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGGG 3416 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || ||| ||| | | || | ||| |||| |||||| | Sbjct 3417 ATCCCTTCCTTGTCTTGAATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAACC 3476 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || || || | || || || ||||||||||| Sbjct 3477 TCTAACGTAATAGTCTTCCCAGTCAACGTCTTGACAAAAATCTGCAT 3523 >seq2531 Length=57720 Score = 98.7 bits (108), Expect = 9e-16 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| ||| || || | ||||||||||| || |||||||| || ||| Sbjct 24815 CCACCACGGAGACGCAACACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCACTC 24756 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| ||| |||| | ||| || ||||| |||||| Sbjct 24755 AAGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCAGGAGGG 24696 Query 131128 AT 131129 || Sbjct 24695 AT 24694 >seq6955 Length=16480 Score = 86.0 bits (94), Expect = 6e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 || ||||| ||||| | || |||||||| ||| |||||| |||| |||||||| Sbjct 7976 ACCTTCGCGGAGCGGCTAGTTGCCTTTGCTTCTGTAGAGGGCATCTTCTTTTCTGGATCG 7917 Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263 ||||| ||||||||| | || | ||| | ||||| || ||||| || ||| Sbjct 7916 TTTGCGTCCATCTTTTGGTTAAAGAAGCGGGGACTGATGCCTGGTCTGACTTTCTCCAAT 7857 Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT 46310 ||||| || || || ||||| |||| || |||||||||||||| Sbjct 7856 GAGCTCATTAGTCGTGATGAGGGTATGCACACTGACTTTGCGTGTCT 7810 >seq583 Length=22390 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||||| || | ||| | |||||||||||| || ||||||||||| Sbjct 82 CCTCCACGCAGACGCAAGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGAG 141 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | || || ||||| || ||| Sbjct 142 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGTTGGTCGGGCGGG 201 Query 131128 AT 131129 || Sbjct 202 AT 203 >seq580 Length=8796 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||| ||||| || ||||||||||| || Sbjct 8072 CCACCACGGAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAG 8131 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| ||||| ||||| || | || | |||||||||||| ||||| Sbjct 8132 AGTGTTCGGCCATCCTCCAGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGA 8191 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||||||||| ||| | | || || | | || | || || | ||||||| Sbjct 8192 ATGCCTTCTTTGTC-CTGAATCTTGGCTTTCACGTTGTCAATGGTGTCCGATGACTCGAC 8250 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | |||| || || || || || || || ||||| || |||||| Sbjct 8251 CTCCAGTGTAATAGTCTTCCCCGTCAGGGTCTTGACGAAGATTTGCATG 8299 >seq4313 Length=23148 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || ||||| || | |||||||| || || |||||||| ||||||| ||| || Sbjct 10884 CGGAGGACTAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCA 10825 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 ||||| || |||||||| || |||| | |||||||||||| || || || Sbjct 10824 TCCTCGAGTTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGAAT 10775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471868818395520