Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05]
24,403 sequences; 52,984,320 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq580 96.9 2e-15
>seq580
Length=8796
Score = 96.9 bits (106), Expect = 2e-15
Identities = 146/208 (70%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 38110 CCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTA 38169
|||||||||| || |||||||| || ||||||||||| ||||| || | || || |
Sbjct 7863 CCAAATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCA 7922
Query 38170 ATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAA 38229
|| || |||||||| || || ||||| ||||||| || | ||||| |||||| |
Sbjct 7923 GCTGCTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTA 7982
Query 38230 TTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTAC 38289
| || ||| || || | || ||||| | || || || | || || || ||||
Sbjct 7983 TCTTGGCCTTGACGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTAC 8042
Query 38290 CCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | ||| || ||||| || |||||
Sbjct 8043 CAGTAAGGGTCTTGACGAAGATTTGCAT 8070
Score = 82.4 bits (90), Expect = 5e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||| | || | ||||| ||| ||| || ||||| ||||| ||||
Sbjct 8070 TACCACCACGGAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAG 8129
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | || | || || | ||||| || ||||| || || || || || |||| |
Sbjct 8130 AGAGTGTTCGGCCATCCTCCAGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAG 8189
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||||||||||| ||| || ||||| || | | || || || |
Sbjct 8190 GAATGCCTTCTTTGTCCTGAATCTTGGCTTTCACGTTGTCAATGGTGTCCGATGACTCGA 8249
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
| || | ||||||||| || ||||||| ||| || ||||| || ||||||
Sbjct 8250 CCTCCAGTGTAATAGTCTTCCCCGTCAGGGTCTTGACGAAGATTTGCATG 8299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334847582829893
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |