Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq6955 192 7e-44 >seq6955 Length=16480 Score = 192 bits (212), Expect = 7e-44 Identities = 388/571 (68%), Gaps = 11/571 (2%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 ||||||||||| || || | ||| || || || || | ||||||| ||| || | | Sbjct 7813 CACGCAAAGTCAGTGTGCATACCCTCATCACGACTAATGAGCTCATTGGAGAAAGTCAGA 7872 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | |||||| || ||||| | |||||| || || ||||| |||||||| || Sbjct 7873 CCAGGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGACGCAAACGATCCAGAAAAGAAG 7932 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271 || || || || | ||||| || || | || || || || | | | || | Sbjct 7933 ATGCCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCGCGAAGGTGGAGCGATGGTCGGAT 7992 Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331 ||||| ||||||||| || || || || || || |||| ||||||||| || | Sbjct 7993 ATCCAACGTAAAGCCCAGTCAGCCTTGAGTTTTATGCATGGTATTGTTTCGATTGCATCG 8052 Query 93332 AATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391 || ||||| |||| | | | || ||||| ||||| || | || ||||| | Sbjct 8053 AAAAGGTAGTCTCTCCGGGAAGGTTCCTTGATGTAGGTATCAATGAGGAGGGAATATGTC 8112 Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451 ||||| |||| |||||||| ||||| || ||||| || || | || || | | Sbjct 8113 TCAGAGTGGATGTTCTCCATCATGATTTGAAAGCCGTAAAAGCAACGTGCCTCTGCGGCT 8172 Query 93452 TGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCa 93511 ||||| |||| ||||||| ||| || || || |||||||| || || || || || || Sbjct 8173 TGCACCTCTTTCGAAAATCGCTCGACCAGGTTCTCATTGACAATGCCGTCAGAAGCCGCG 8232 Query 93512 aaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCCAA 93568 ||||| || | | || || || || | |||| || |||||| |||| ||| Sbjct 8233 AAAAATGCGAGGACGTGAGAGATGAAGTGATGTTCATTTTCGTTAAGCTTGTTATTCCAG 8292 Query 93569 TCGGATAGAT---CTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 ||| ||||| | |||| ||| || | |||||| | ||||| || || || || || Sbjct 8293 TCG--TAGATGTCCATTTGTAAG-TCCATTTCTTCAGCGGTCCAGAAAGAAGCCTCAGCC 8349 Query 93626 TTTTTGTACATATCCCATATGTCTTGATATT 93656 ||||||||||| ||||||| |||||| ||| Sbjct 8350 TTTTTGTACATTTCCCATA--TCTTGAAATT 8378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556690936573720