Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4584 123 5e-23 seq4583 107 4e-18 seq6019 104 5e-17 seq1637 93.3 9e-14 seq6955 89.7 1e-12 seq4646 87.8 4e-12 seq3112 87.8 4e-12 >seq4584 Length=6343 Score = 123 bits (136), Expect = 5e-23 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 251544 ATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCAT 251603 ||| || || ||||| |||||||| |||| |||||||| || ||||| | ||||| Sbjct 4081 ATAATCTGACACACGCTTCTCGAAGAAGTTAGTCTTGCCCTGAAGCGAGATCATGTCCAT 4022 Query 251604 GAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCG 251663 |||||||||||| ||||||| |||||| |||| || |||||| || |||| | ||| Sbjct 4021 GAAGTCGAAGGGATTTGTGGAGTTGTACACCTTGTCATTGCCAAGGGCCACGAGCAGGCG 3962 Query 251664 GTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 || || |||||||| | || || | ||| || | |||||||||||||| Sbjct 3961 ATCAGCAACAAACTCAATGTATTGGCACATGAGCTTGGAGTTCATGCCAAT 3911 >seq4583 Length=9780 Score = 107 bits (118), Expect = 4e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| |||| |||||||| || ||||| | |||||||||||||||||||| || Sbjct 7500 TCGAAGAAGTTAGTCTTGCCCTGGAGCGAGATCATGTCCATGAAGTCGAAGGGGTTCGTT 7441 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | |||||| |||| | |||||| ||||| | | || || || |||||||| | Sbjct 7440 GAGTTGTACACCTTGTCGTTGCCAAGGGCTACAAGCAGACGATCGGCGACAAACTCAATG 7381 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 || || | ||| || | |||||||||||||| Sbjct 7380 TATTGGCACATGAGCTTGGAGTTCATGCCAAT 7349 >seq6019 Length=9942 Score = 104 bits (114), Expect = 5e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| |||| |||||||| || ||||| | |||||||||||||||||||| || Sbjct 2530 TCGAAGAAGTTAGTCTTGCCCTGGAGCGAGATCATGTCCATGAAGTCGAAGGGGTTCGTT 2471 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | |||||| |||| | |||||| || || | | || || || |||||||| | Sbjct 2470 GAGTTGTACACCTTGTCGTTGCCAAGGGCGACAAGCAGACGATCGGCAACAAACTCAATG 2411 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 || || | ||| || | |||||||||||||| Sbjct 2410 TATTGGCACATGAGCTTGGAGTTCATGCCAAT 2379 >seq1637 Length=49297 Score = 93.3 bits (102), Expect = 9e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 280254 TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAG 280313 |||||||| || ||| || || | |||||| ||||||||||| |||||||||||||| Sbjct 24559 TGGAAGCACCCTAACTTGGTTATTGGTTACGTTGCTCAGCACGCCTTCCACCACATCGAT 24618 Query 280314 AACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTA 280357 |||||||| |||| ||| ||| | | ||||| | |||||| || Sbjct 24619 AACCACCTAGACAAGACGCCTCTCGAGTACATGCTGTGGCGTTA 24662 >seq6955 Length=16480 Score = 89.7 bits (98), Expect = 1e-12 Identities = 123/168 (73%), Gaps = 3/168 (2%) Strand=Plus/Plus Query 251562 TTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGT 251621 ||| |||||||| | |||||||| || || || | |||||||||||||| ||||| || Sbjct 7491 TTCAAAGAAATTGGTCTTGCCCTGCAAGGAAATCATATCCATGAAGTCGAACGGGTTGGT 7550 Query 251622 GGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATG-CGGTCTGCCACAAACTCCA 251680 | |||||| ||| | ||||| || || |||| | ||||| || |||||||| | Sbjct 7551 TGAGTTGTACACCTTTTCGTTTCCAAGGGCGAC-AAGAAGACGGTCGGCAACAAACTCGA 7609 Query 251681 GATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATA-CGACAAGGA 251727 ||||| | ||| |||| | |||||||| || | | ||||| ||| Sbjct 7610 TGTACTGACACATGAGTTTTGCATTCATGCCTATGAGACCGACAGGGA 7657 >seq4646 Length=10087 Score = 87.8 bits (96), Expect = 4e-12 Identities = 161/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 293131 AAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGAGATCTCCCACGATGTC 293190 || ||||||||||||||||||||||| || | ||||| |||||||||| ||| Sbjct 3539 AAAGCACCACGATCAGCAGCGAGGTCGATGATCTTCTTCTGGCTGATCTCCCACACCGTC 3598 Query 293191 TTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTGGATAGACCCTCCGTTG 293250 ||||| | |||||||| | | ||||| | || || ||||| || || || Sbjct 3599 TTGTAGATAGCCTTGACGTTGTCAGGAATGTTAGGAATGTTTTGGATGGAACCATTGTGC 3658 Query 293251 GCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCACGAGCAATGAGCTCGCGGACA 293310 ||||| ||| ||||||||| | || ||| ||| | ||| ||| || |||| Sbjct 3659 GCAATGATCATGTTCTTCATGTTATCATCCCAGAGACCAAGGTCAACGAGTTCACGGAGG 3718 Query 293311 AGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGTAAATGTT 293366 || | | | || || |||| ||||||||||| |||||| |||| ||||| Sbjct 3719 AGCCAGGGGCAAACGACCTGGAATTCACCAGCGAGCACGCGACGAGTGTAGATGTT 3774 >seq3112 Length=18921 Score = 87.8 bits (96), Expect = 4e-12 Identities = 203/306 (66%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 218654 TTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGC 218713 || ||||||| ||| || ||||||||| ||||||| |||| ||||||||||||||| Sbjct 2758 TTTAGGTCGCCCAGCTTGTTGGTTATGTCTCCGAAAAATCTGCATACCATCACGGTGAGG 2699 Query 218714 AGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGA 218773 ||| || || | || || | || ||| | | ||| || |||||||| | Sbjct 2698 CTAGTTTGGCGGCAACTATCGTCAATCTTGCGCAGAATTTTGTTGGATCCAACAACATCA 2639 Query 218774 ACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTT 218833 || | || | || || || ||||| |||||||| |||||||| || ||| | Sbjct 2638 ACATACTCATGCCTAATGGACAGTTCGGTTCTCGAGACCAAGGTGGAAAAGACCATGCCT 2579 Query 218834 CTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAGGTGTTCAATCAGGCCG 218893 || | ||||| || || ||| || || || | || || | | ||| ||| ||| Sbjct 2578 CTCCTAGGTACATTTTCACAGAGCCTTCCCCTATCACACGATCGATCTTCCATCCTTCCG 2519 Query 218894 ATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGTGGTATG 218953 | |||| || | || | || ||||||||||| | |||| || || |||||| Sbjct 2518 ACGATGCACTTTTGAAATCTCAGGAGGACGATGGGCTGACCGTTGAACCTGAATGGTATA 2459 Query 218954 TGCCTG 218959 | |||| Sbjct 2458 TTCCTG 2453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027515433012923